Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0615400
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Entry
Os07g0615400 CDS
T02163
Name
(GenBank) Similar to Oligouridylate binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os07g0615400
03041 Spliceosome [BR:
dosa03041
]
Os07g0615400
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Os07g0615400
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
Os07g0615400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_7
RRM_5
Motif
Other DBs
NCBI-ProteinID:
BAF22183
RAP-DB:
Os07g0615400
UniProt:
B9FU82
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All DBs
Position
7
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AA seq
427 aa
AA seq
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MLPQQQQQQKQQAAALMPPSMYAMPPPPPLHHHHHPLLAAAPPQQQIEPILTGNLPPGFD
TSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYGFVDYYDRRSAALSIL
TLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSALFAFFSGYSSCSDAR
VMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNWATKGASNGEQQTSDS
KNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQDVLHRLFHALGAGAIEE
VRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNKPTPPGTTSAPLPPPAA
PSVTAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQAMGMGAGVSQAMYDASFPNVGPS
QQQLMYY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgcagcagcagcagcagcagaagcagcaggcggcggcgctgatgccgccgtcc
atgtacgcgatgccgccaccgccgccgctccaccaccaccaccacccgctcctcgccgcc
gcgccgccccagcagcagatagagccaatccttactggaaatctgcctcctggctttgat
acgagtacatgccgcagtgtatatgttggcaatgttcatgttcaagtcacagaggcactt
ctccgagaggtttttcagagtactggtttagttgaaggatgcaagcttatacgaaaagag
aagtcatcttatggctttgttgactactatgaccgcagatcagctgcattatcaattttg
acacttaatggaaagcaaatttttgggcagcttatcagagttaattgggcatatgctagt
gggcagagggaggacacaacagaccatttcaatatttttgttggtgatcttagcccagag
gttactgattccgcattatttgcattcttctctggatattccagttgctctgatgcccga
gttatgtgggatcaaaagactggaagatctagaggttatggctttgtttccttcaggaat
caacaggatgcacaaagtgccataaatgacctaaatggacaatggcttggaagtcggcag
atacgctgcaactgggcaacaaagggtgccagcaatggcgagcagcagacttcagattca
aaaaacgtagctgatctgactaacaatttgacagaagacgggaaggagaaagcaaatgaa
gatgccccagagaacaatccacagtacagaactgtttatgttggaaaccttgctcacgag
gttactcaagatgtgctccatcgtcttttccacgcacttggagctggggccattgaggag
gtccggatccagcttggcaaaggatttggcttcgtcagatacagcaaccacgcagaagcc
gccctcgcaatccagatgggaaacggtcgcattctaggtggtaaaccaatcaagtgttcc
tggggcaacaagccgacgccacccggcaccacgtcggcgcctctgccccctcccgccgct
cccagcgtgacggcggccgatctcctcgagtaccagcgcagcctcgccttgagcaagatg
gtgtcaagccaggcgctgatgcaggctcaggcacagcagcatctgaagcaggcaatgggg
atgggtgcaggcgtgagccaggccatgtatgatgccagcttccccaacgttggcccctcg
cagcagcagctcatgtactactga
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