Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0647900
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Entry
Os07g0647900 CDS
T02163
Name
(GenBank) DEAD/DEAH box helicase, N-terminal domain containing protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os07g0647900
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Os07g0647900
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
90S particles
Helicases
Os07g0647900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
BAF22387
RAP-DB:
Os07g0647900
UniProt:
Q5K5B6
LinkDB
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Position
7
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AA seq
540 aa
AA seq
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MEKAKLSSALFAGTHFDRKRFAGDFARFRQGPPAPDVASAAAPSPEKKRKRQSKAKAKKS
KKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEKKVETGKSEDSEVVRRRKEVEREIER
AAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPIL
LSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAK
GRKFYIKLMTKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLF
ELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIK
QKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLD
EEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAG
RSGEAITFFTEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKHRVNRDPISTLPDED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcgaagctctcgtcggcgctcttcgccggcacgcacttcgaccgcaagcgc
ttcgccggcgacttcgcccggttccggcaaggcccgcctgccccagacgtggcctccgcc
gccgcgccgtcgccggagaagaagcggaagcgccagagcaaggccaaggcgaagaagagc
aagaagaggcgggcggaaggcgccgactctgcttccgatgctgtggaagggttcagtgtg
ttcaagggattggcagcaaagaaggatgaggacgattcggagaagaaggtcgagactggt
aagagtgaggactcggaggttgtaaggcggaggaaggaagtcgagagagaaatcgagaga
gcggcaatactacggaagaagtttgatattcacatttcaggacaaaatgttccagcaccg
ctagagaactttgaagaactggtttcaaggtatggttgcgactcatatttggttggaaac
ttgtcaaaacttggatttcaagaacctacacctatccaaaggcaggccattccaattctt
ctatccgggagagagtgctttgcctgtgcacctacaggttctggcaagactttggctttc
ttgttcccaatccttatgaaaatcaagccaggatctaaagagggtgttaaagctgtgatt
ctttgcccaacaagggaattggcagcacaaaccacaagagagtgcaagaagttagcaaaa
ggaagaaagttttatattaaactaatgacaaaagatctatcaaaatctgggaatttcaag
gatatgcattgtgacatcctgatctccaccccacttcgtctggaccacgctgtacaaaaa
agagaccttgatttaagtagagtggaataccttgtcttggatgaatctgataaacttttt
gagcttggatttgttgaagtgattgattcagttgtcaaagcctgctcgaatccttcaata
attcgatctctgtttagtgccacattgcctgattcaatagaaacgcttgcacgcacgata
atgcacgatgctgttcgagtcatcgtgggaagaaagaattcagcctcttcactgattaag
caaaagttgattttcgctggaactgagaaggggaagttgctagctcttcgccaaagcttt
gcagaatctctcaatcctccagtattgatctttgttcaaagcaaagagagggcaaaagaa
ctttacaaagaactggcatttgatgacgtaagagctgatgtaattcatgcggaccttgat
gaggagcagcgtcaagatgctgttgacaacttgagagccggaaagacttgggtactgata
gctaccgaagtcattgcccggggaatggatttcaaaggtgttaactgcgttatcaactat
gattttccagagtcagcttctgcctatattcaccgaataggacgatctggaagagcaggt
agatcaggggaggccatcacattcttcaccgaggaggataagccattcttgcggaacatc
gcaaatgtgctgatatcttcaggctgcgaggttccttcttggataaaggcattgcctaaa
ctcaagcgcaagaagcacagggtgaaccgggatcccatctccacattaccagacgaagat
tga
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