Oryza sativa japonica (Japanese rice) (RAPDB): Os07g0673500
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Entry
Os07g0673500 CDS
T02163
Name
(GenBank) Similar to ASF/SF2-like pre-mRNA splicing factor SRP32''
KO
K12890
serine/arginine-rich splicing factor 1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os07g0673500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os07g0673500
Spliceosome [BR:
dosa03041
]
Common components
Common spliceosomal components
SR proteins
Os07g0673500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
BAF22522
RAP-DB:
Os07g0673500
UniProt:
A0A0P0XA03
LinkDB
All DBs
Position
7
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AA seq
296 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAED
AIRGRDGYNFDGNRLRVELAHGGRGNSSSFNNSGGGGRRGGVSRHTEYRVLVTGLPSSAS
WQDLKDHMRNAGDVCYSEVYREGGGTIGIVDYTNYDDMKYAIRKLDDSEFKNAFSKAYIR
VKEYDGKRSRSYSRSRSRSRGRSYSRSRSPSKSPKGKSSRRSASRSRSRSASSRSRSESK
GRSPSRSPARSQSPNTSPANGDAASPKKRSPSRSPPKKRSPSRSPSRSRSPDAKSE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcgctggagcaggacaatttatgtcgggaacctcccgggcgacatcagggag
agggaggtagaggatctgttctacaagtatggacgcattgttgatattgacttgaagatc
cccccaaggccgcctggttttgcttttgttgagttcgaagatccccgtgatgctgaagat
gcaatccgtggacgggatggctataattttgatgggaaccgtttgagggtggaacttgca
catggtgggagaggtaactcttcctcctttaacaattctggtggagggggacgtcgtggg
ggtgtatctaggcatacagagtatcgcgttctggttactggactaccttcttcagcatca
tggcaagacctaaaggaccatatgcgaaatgctggtgatgtttgttactctgaagtgtac
cgtgagggtggtggtactataggaattgtagactacacaaactatgatgacatgaagtat
gctatcaggaaacttgatgattctgaatttaagaatgccttctcaaaggcctatataagg
gtgaaggagtatgatggaaagcgcagccgttcatactcacgaagccgaagccgaagtcga
ggtcgcagctacagcagaagcaggagtccaagcaagtctcccaagggaaagtcatcacgc
cgttcagcatctagatctcgatcgagatcagcttcttcccgttcaagatcagagtcaaag
gggcgctctccatcaagatcaccagcaagatctcagtctccaaatacttctcctgccaat
ggtgatgcagcaagccccaagaaacgcagcccaagcaggagcccccccaagaaacgtagc
ccaagcaggagcccatcacgttcccgatctcctgatgccaagtccgaatga
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