Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0233300-01
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Entry
Os07t0233300-01 CDS
T02163
Symbol
Os07g0233300
Name
(RAP-DB) Similar to Nucleic acid binding protein-like.
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os07t0233300-01 (Os07g0233300)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
Os07t0233300-01 (Os07g0233300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alfin
PHD
ASH2L-like_WH
C1_1
PHD_4
Motif
Other DBs
RAP-DB:
Os07t0233300-01
LinkDB
All DBs
Position
chr07:complement(join(7417886..7417988,7417735..7417767,7417415..7417637,7415275..7415398,7414923..7415174))
AA seq
244 aa
AA seq
DB search
MEMAAPVSPAPRTVEDIFKDFSGRRAGLVRALTVDVDEFYGFCDPEKENLCLYGHPNGRW
EVALPAEEVPPELPEPALGINFARDGMHRRDWLSLVAVHSDSWLLSVAFFFGARLNGNER
KRLFSLINDHPTVLEALSDRKHGRDNKSGADNGSKSRHSGKRANDVQTKTSRPAVVDDGY
DEEEHSETLCGTCGGRYNANEFWIGCDICERWFHGKCVRITPAKAEHIKHYKCPDCSSSK
KSRQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggagatggccgcccccgtctcccccgcgccgcgcaccgtcgaggacatcttcaaggac
ttctccggccgccgcgccggcctcgtccgcgccctcaccgtcgatgtggatgagttctac
ggattctgcgacccagagaaggagaatttgtgcctgtacgggcacccgaacgggcggtgg
gaggtggcgctgccggcggaggaggtgccgccggagctgccggagccggcgctcgggatc
aacttcgccagggacgggatgcaccgccgcgactggctctcgctcgtcgccgtccactcc
gactcgtggctgctctccgtcgccttcttcttcggcgcgcgcctcaacggcaacgagagg
aagcgcttattcagcttgatcaatgaccatccaaccgtgcttgaagcactgtctgatagg
aagcatggaagggataataaatctggtgccgacaatggcagcaaatccaggcactcagga
aagcgagcaaatgacgtgcagacaaaaacctcgaggccagcagttgttgacgatgggtac
gatgaagaagaacacagtgaaaccctatgtggaacctgcggtggccgctacaacgccaac
gagttttggattgggtgcgacatttgcgagcggtggttccacggcaaatgcgttaggata
acaccagcgaaagcggaacacataaagcactacaagtgccctgattgcagcagctccaag
aagagtaggcaataa
DBGET
integrated database retrieval system
