Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0608200-01
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Entry
Os07t0608200-01 CDS
T02163
Symbol
Os07g0608200
Name
(RAP-DB) Similar to CCAAT-binding transcription factor subunit B (CBF-B) (NF-Y protein chain A) (NF-YA) (CAAT-box DNA binding protein subunit A). Splice isoform Short.
KO
K08064
nuclear transcription factor Y, alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os07t0608200-01 (Os07g0608200)
Transcription factors [BR:
dosa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
Os07t0608200-01 (Os07g0608200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFB_NFYA
Motif
Other DBs
RAP-DB:
Os07t0608200-01
LinkDB
All DBs
Position
chr07:complement(join(24999670..24999726,24999426..24999576,24998671..24998777,24998521..24998589,24997787..24997954,24997046..24997408))
AA seq
304 aa
AA seq
DB search
MLMLLRQMEDHRAHTTPNYDFFSGDYQMKQLGHKMYDQDSPSSDSGQSHQEESAMNDSSP
NERHTSTQSDNDDGHQMPDQDKTKSVSSLGNPGALPPKLNYSQSFACIPYTADAYYGGVL
TGYSSHAIVHPQQNGTANSRVPLPVEPAAEEPIFVNAKQYHAILRRRQIRAKLEAQNKLV
KGRKPYLHESRHRHAMKRARGSGGRFLNTKQLEEQKQQQEEEAASGGASSGNRTCLQNGT
GSAPSASSPSEIASVSTSREFLGNHEQSHFPSAGFLPTMSFRAQNGGDGKLVANAIHQRV
SMMR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgcttttgcgacaaatggaagatcatcgagcccatactacgcccaactatgat
tttttctctggagattatcagatgaagcagttaggtcataagatgtatgatcaagattcc
ccgtcaagcgattctggacagtcacaccaagaagaatctgccatgaatgatagcagtcca
aatgagcgacatacctcaacacaatctgacaatgatgatggtcatcagatgccagatcag
gacaaaacaaagtcagtatcatcgttggggaatccaggagctttgcctccaaagctcaac
tatagccaatcctttgcttgtattccttatacagctgatgcatactatggtggggtcttg
actggatattcttcacatgcaattgttcatccccagcaaaatggtacagctaactcccgg
gtgccgttgcctgttgagcctgcagcagaagagccaatatttgtaaacgcaaagcagtac
catgcaattcttaggaggagacagatacgagctaaattggaggcccaaaataagttggtg
aaaggtcggaagccatacctccatgaatctcggcatcgccatgccatgaagcgagctcgt
ggatctggagggcgcttcctcaacacaaagcagctcgaggagcagaagcagcaacaggag
gaggaggccgcatccggtggcgcgagctctggcaataggacatgccttcagaatggcacc
ggtagcgcgccttcagcttcctctccctctgaaatcgcgagcgtctcaaccagcagagaa
ttccttggtaaccatgagcagagccacttcccctcagctggcttccttcccacaatgagc
ttcagagcgcagaatggcggagatgggaagctggtcgcgaacgccattcaccagcgcgtt
tccatgatgaggtga
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