Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0100700
Help
Entry
Os08g0100700 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K13095
splicing factor 1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os08g0100700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os08g0100700
Spliceosome [BR:
dosa03041
]
Complex A
Other components
Complex A specific factors
Os08g0100700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
BAF22669
RAP-DB:
Os08g0100700
UniProt:
Q0J8P6
LinkDB
All DBs
Position
8
Genome browser
AA seq
569 aa
AA seq
DB search
LDCISSLGEILHLNPGYKAPEDYKPLLKETKIPLPSEIHQADIGEVQGAYEDLYINVSAD
THDKVDAATALIELLLTPVSINSRAIEANATVSSAVSSGGADLADLRQVQNNSSQPGFLQ
YQSHDAHWLSTSQANAPPIPSSEPPPSALPNNSFPLQPPGGSLSTLSYTGPPPLMNIMPR
NPLPIPGPQPLVSNAQQPPLQFQANPSIGSPFGRPPGIVSPQLTPSSTLPRSVRPLQTPH
ASGGWLNFSSVPVQSQRPSPAFMPVRPPISVSPLVSSPQLEGAAVPSFPRQSNISTSYGT
QHHPSGASFASSATMPSIPPGAPQLSPQGPSSMPVLSSPAGLTTQPPYPLPMQMRPPMAT
PAQMRGPPSPFPQTGPTPGMPPAGGFGVPGSGNMTAMRPPRPSSGDFTFRPLVSASPTPE
LGASGSQVPLFHPGNQRPPMARVEGFQRPIDMGHQGRAYATGPPHPHQHPHPHAHFGGGG
FLPRNPAASVLQSAGTRGFVGAFPLPPAAVEAQRPFHVLAQAQQKPIYDPFVPSGAVMSG
GPGGGGGRKRKTEDDKAEYEDLMASVGVK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ctcgattgtatatcatctttaggtgaaatactccatttaaatccaggatataaggctcct
gaagactacaagcctttactcaaggaaacaaaaatccctttgcctagtgagattcaccaa
gcagacataggtgaagtgcaaggtgcttatgaagacctgtacataaatgtctcagctgac
actcatgacaaagtagatgctgcgactgcactgattgagctgcttcttactcctgtctct
ataaattcaagggctattgaagcaaatgctactgtttcatcagcagttagctcaggcggt
gcagatttagctgacctgcggcaggtgcagaacaacagttctcagccaggttttcttcag
taccaatcacatgatgctcactggctatctacttcccaagccaatgctccaccaattcct
tcctctgagcctccgccgagtgcattacctaacaattcttttccgcttcagcctcctggc
ggttctttgagtacgctttcatacacaggaccaccacctcttatgaatatcatgccaaga
aacccattgcctattcctggacctcagccattggtgtcaaacgctcaacaacctccgctt
caattccaagcaaacccctcaattgggtctccctttggtagaccccctggaattgtaagc
ccgcaactaactccatcttccacattgccgcggtctgttagacctcttcaaacaccccat
gcatctggaggatggctaaatttttcttctgttccagtgcaatctcagaggccttcacca
gcttttatgccagtgagacctcctatttccgtgtctcctcttgtttcaagtccacagctg
gaaggtgccgctgttccatcgtttcctcgtcaatcaaatatctccacaagctatggcact
cagcatcatccatcaggcgcaagctttgcatcttcagcaacaatgccttccatacctcct
ggtgccccccaattgtcacctcagggtccttcctcaatgccagtgctgtcgtctcctgct
gggttaacaacacagccaccttatccgctgccgatgcaaatgcgtcctcccatggcaaca
cctgctcaaatgagaggcccgccttcacctttccctcagactgggccaactcctggcatg
ccacctgctggcgggtttggtgtgcctggttctggaaacatgaccgctatgaggccacca
cgcccaagcagcggtgattttacctttcggcctcttgtgtcagcttcaccaacaccagag
cttggagcatcaggcagtcaagtgccattattccatcctggcaaccagagaccacctatg
gcgcgagttgaaggtttccaaaggcctattgatatgggtcatcagggccgggcgtatgcc
actggtccaccgcatccacatcaacatccacatccacatgcacactttggtggtggaggc
ttcctcccaaggaatccagctgcatctgtgcttcaatcggcagggacaagggggtttgtt
ggagctttccctctcccgccagcggcagttgaagcacaacggccgtttcatgtgttggca
caagcacaacagaagccaatatacgatccatttgtgccgagtggtgcagtaatgtcagga
ggacctggaggtggaggaggaagaaaaaggaagacggaggatgacaaggctgagtacgag
gatctcatggcgtccgttggtgtcaagtga
DBGET
integrated database retrieval system
