Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0160000
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Entry
Os08g0160000 CDS
T02163
Name
(GenBank) Protein of unknown function DUF783 family protein
KO
K13176
THO complex subunit 7
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03013
Nucleocytoplasmic transport
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os08g0160000
09122 Translation
03013 Nucleocytoplasmic transport
Os08g0160000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os08g0160000
03041 Spliceosome [BR:
dosa03041
]
Os08g0160000
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Os08g0160000
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Os08g0160000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
ArsR
YwqH-like
APG6_N
TMEM120A-B
Motif
Other DBs
NCBI-ProteinID:
BAF22960
RAP-DB:
Os08g0160000
UniProt:
B7E3I6
Q0J7V5
LinkDB
All DBs
Position
8
Genome browser
AA seq
242 aa
AA seq
DB search
MLAKGRKVAGRGGDMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNISDCERLYKAFLQEINTFELPLLKSKAVVDANLREKESFNELQDEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIANLEAENTA
CIRTLELRKKQFALLLHVVEELQISIDDEQRSIADELRAATEEQKMSIEEVSGGASDAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccaaagggaggaaagttgctggaaggggcggagacatgtctgcacactatgca
tttgggccgcaggaagatgatgcgattattaaacataggcttctgaccaggacaacaact
accaggggtgaaccaccacttaagaagcttcagaagaagttcatgtcctttgccactgag
gttgagaaggatgcagacaacataagtgactgtgagaggctgtacaaggcctttttacag
gaaattaatacttttgagctgcctcttcttaaaagcaaggctgtcgttgatgcaaacctt
agggagaaggagagcttcaacgagctgcaggatgagattcagcgacaaatcttgcaagct
cagactgatattgaggatctcaagaagcaactggaacagagcaaaattgagaggcagcac
aaagaggagtgcgaagcaatcagaaaaatgatttctttgcagcctccacgatcagaaaca
gaaaagctcattgcggatcttgagaaggagattgctaatttggaggctgagaatactgca
tgtataaggaccctggaactaaggaagaagcagtttgctcttcttcttcatgtggtcgag
gaactgcagatctcgatcgatgatgagcagaggagcatagcagatgagctgagagctgcc
actgaagagcagaagatgagcatagaggaagttagcggcggtgcttcagatgccatggct
gtagattga
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