Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0178300
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Entry
Os08g0178300 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os08g0178300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os08g0178300
Spliceosome [BR:
dosa03041
]
Complex B
Other components
RES complex
Os08g0178300
Complex C
Os08g0178300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bud13
Motif
Other DBs
NCBI-ProteinID:
BAF23042
RAP-DB:
Os08g0178300
UniProt:
Q0J7M3
LinkDB
All DBs
Position
8
Genome browser
AA seq
552 aa
AA seq
DB search
MATKQQDASTSGAAMSMKEYLKRYQSDDAQGKAKKKKKKKPKPAAAVGGGVLIVDEDPTW
HKPVQIEEEPASSGDERPLVDEDIEVKRMRRLEAIRAARPYNAIAEDGSGWVTVAAPEDS
DGGLTGRRRRNDTPSPERGGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPPRQRRRRQ
DTPSPKGSEVAGGHDDLSPPRKSRQQRDPSPPRRLSRHDSKESQDISPPRRRTRHDSEEP
QDLSPPRRKGRHDSEEPKDLLPPWRRVRHDSEEPKDLSPPRRRTRHDSEEPEDLSPPRRR
TRHDSHEPKDKLPPLKRQALGDGDISPPRKGRKEVAPKEVRKAGLMTAEEVKEDIRKIKE
DERLKFAAQDPSVIGKGAKAVFRDKQGKRISEEDMRKAKEDTKPKEIHIEWGKGLVQKRE
AEARLQELESEKSKPFARTRDDPELDTMLKNRIRWGDPMAHLVKRNDTDLLLEDLGDDEK
MKESGFIVPQNIPSHSWLKRGVDPPPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQAT
EQEAYLWSVADM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaagcagcaggacgcttcgacgtccggcgcggccatgtccatgaaggagtac
ctcaagaggtaccaatccgacgacgcgcagggcaaggccaagaagaagaagaagaagaag
cccaagcccgcggccgccgtgggcggaggtgtgcttatcgtcgacgaggaccccacgtgg
cacaagcccgtccagatcgaggaggagcccgcgtcgtccggggatgagagaccgttggtg
gacgaggacatcgaggtcaagcggatgcgccgcctggaggcgattcgcgcggcgcggccg
tacaatgctatcgctgaggacggaagcgggtgggtcaccgtggccgcccccgaggactcc
gatggtggtttaaccggtcgccgccgcagaaatgacacgccctcaccggagcgcgggggt
gctggaaggaaggatctgtctcctccgcggcggaggcagcggcaggatacgccctcgccg
gacccgagagatgctgcgggtaaggatctgtcgccgccgaggcagaggcgaaggcggcaa
gacacgccgtcaccaaagggtagtgaggtagctggggggcatgatgatttgtcaccaccg
cggaagtctaggcagcaacgagacccctctcctccacgcaggctctctcgccatgactcc
aaggaatcccaggacatttcaccaccacgaaggcgtaccaggcatgactcagaggagcca
caggacctctctccaccacgccggaaggggcggcatgattctgaagaacccaaagacctc
ttgccaccatggaggcgcgtgaggcatgattctgaggaacccaaagacctctcgccacca
cggaggcgcacgagacatgattcagaagagcccgaagacctctctcccccacgcagacgg
acgcggcacgactctcatgaacccaaggacaaattgccaccactgaaaaggcaggctttg
ggtgatggggacatttcacctccaaggaagggtaggaaggaagtggctccgaaggaggtg
aggaaagctgggttgatgacagcagaggaagttaaagaggacatcaggaagattaaggag
gatgagaggctcaagtttgctgcacaggatccctcagtgattgggaaaggggcaaaagca
gtattccgagataaacaaggaaaacgaataagtgaagaagatatgaggaaggcaaaggaa
gacacgaaaccaaaggaaatacatatagaatggggtaaagggttggtgcagaagcgagaa
gctgaggctagattacaggagcttgaatctgaaaagagtaagccatttgcacggacaagg
gatgatcctgagctcgacaccatgctaaaaaacagaatccggtggggtgatcctatggct
catcttgtcaagaggaatgatacagacctccttctggaggacttgggagatgatgaaaag
atgaaagaatctggcttcattgttccccaaaatatacctagtcacagctggctgaagcgt
ggtgtagatcctcctccaaaccgctacggcataaagcctggtcgtcattgggacggagtg
gatcgcagcaatggatttgagaaggatatgtttaagctgaagaacgagaagcaagcaacg
gagcaagaggcctacctttggtctgtcgcagatatgtga
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integrated database retrieval system
