Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0308100
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Entry
Os08g0308100 CDS
T02163
Name
(GenBank) Similar to TGF-beta receptor-interacting protein 1
KO
K03246
translation initiation factor 3 subunit I
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dosa03012
]
Os08g0308100
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-3
Os08g0308100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-ProteinID:
BAF23422
RAP-DB:
Os08g0308100
UniProt:
Q6YXE9
LinkDB
All DBs
Position
8
Genome browser
AA seq
326 aa
AA seq
DB search
MRPILMKGHERPLTFLRYNRDGDLLFSCAKDHTPNVWFADNGDRLGTYRGHNGAVWSCDV
SRDSTRLITGSADQTAKLWDVQTGRELFTFRFDAPARSVEFAIGDGLAVITTDNFMENVP
TAQVKRIAEDPDDQSEESLLVITGIKGRINRAVWGPLNRTIITAGEDATIRIWDTETGQC
LKESDKEQGHQKTITSLSKSADWSHFLTGSLDKSAKLWDTRTLTLIKTYVTERPVNAVDI
SPLLDHVVIGGGQDAMNVTMTDRRAGKFEAKFFHKILQEEIGGVKGHFGPINALAFNPDG
RSFSSGGEDGYVRLHHFDSDYFNIKI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatcctgatgaaggggcacgagcgcccgctcacgttcctccggtacaaccgc
gacggggacctcctcttctcctgcgccaaggaccacacccccaacgtctggttcgccgac
aacggcgaccgcctcggcacctaccgcggccacaacggcgccgtctggtcctgcgacgtc
tcccgcgactccacccgcctcatcaccggcagcgccgaccagaccgccaagctctgggac
gtgcagaccgggagggagctcttcaccttccgcttcgacgcccccgcccgctccgttgaa
tttgccattggcgacggcctcgccgtcatcaccaccgacaacttcatggagaacgtgccc
accgcccaggtcaagcgcatcgccgaggaccccgatgaccagtcggaggagtctcttctc
gtgattactggcatcaaggggaggatcaacagggccgtgtgggggccgttgaacaggact
atcatcaccgccggtgaggatgctaccatccgcatttgggacacagagactggacaatgt
ctgaaggagtcagacaaagagcaaggacatcagaaaacaattacttcactttcaaaatct
gcagattggtcgcatttcctaacaggctccttggataagtctgctaagctatgggataca
agaactctgacgctgatcaagacatatgtcactgagcgacctgttaatgctgttgacatt
tctcctcttcttgaccatgtggttattggaggtggtcaagatgcgatgaatgtgactatg
acagatcgtcgtgcaggaaaatttgaagcgaaattttttcacaagattttgcaagaggaa
attggtggtgttaaaggccattttggaccaattaacgcgctggcatttaatcctgatggg
cggagcttttcgagtggtggtgaagatggatatgtaaggctgcaccattttgattctgac
tacttcaacatcaagatttaa
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