KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0375700
Entry
Os08g0375700      CDS       T02163                                 
Name
(GenBank) SKP1 component family protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03083  Polycomb repressive complex
dosa04120  Ubiquitin mediated proteolysis
dosa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    Os08g0375700
   04120 Ubiquitin mediated proteolysis
    Os08g0375700
  09126 Chromosome
   03083 Polycomb repressive complex
    Os08g0375700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os08g0375700
   04121 Ubiquitin system [BR:dosa04121]
    Os08g0375700
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os08g0375700
Membrane trafficking [BR:dosa04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    Os08g0375700
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     Os08g0375700
   Cul7 complex
     Os08g0375700
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     Os08g0375700
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     Os08g0375700
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-ProteinID: BAF23586
RAP-DB: Os08g0375700
UniProt: Q7E0X8 Q8GVW5
LinkDB
Position
8:17713220..17713948
AA seq 169 aa
MAATADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAK
VVEYFKKHAAVTPKPATEAVAADKAKREEELKSFDAEFVDVDRTMVFELILAANFLNAQD
LLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcggcgacagcggacaacggcgaaaagatgatcctcctgatcagctcggacggcgag
cgttttgagctgtcggaggcggcggcgagtcagtcaaagacgttatcccacatgatcgag
gatgactgcaccgacaatggggttcccctccccaacgtcaccgccgtcgttctcgccaag
gtggtcgagtacttcaagaaacacgccgccgtcacccccaagccggccacagaagccgtc
gccgctgataaagcgaagagggaggaggagctcaagagcttcgacgccgagttcgtcgac
gtcgacaggacgatggtgttcgagttgattttggctgcaaacttcttgaacgcgcaggac
ctgctagatctgacctgccagcacgcggcggacttgatcaaagacatgtcggtggaggag
gtcagggaggtgttcaacatcaccaatgacttcacgccagaggaggaggcggaggtccgt
aaggagaacgcttgggcttttgacaactag

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