Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0416400
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Entry
Os08g0416400 CDS
T02163
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
KO
K12822
RNA-binding protein 25
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os08g0416400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os08g0416400
Spliceosome [BR:
dosa03041
]
Complex A
U1 snRNP components
U1 related factors
Os08g0416400
Complex B
Os08g0416400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-ProteinID:
BAF23723
RAP-DB:
Os08g0416400
UniProt:
A0A0P0XFM8
LinkDB
All DBs
Position
8
Genome browser
AA seq
503 aa
AA seq
DB search
MAAVAPPPDGLDPPPATPPTAAAGTPPLAVPATNTPPNPATTPTPLTPNPNPSPTLPPPP
MSTPPVVAPPMHSFAPSFRPLGAPPPPPPPQQVQVQVPPQYGGVPNPGYPMAQQMQPPGV
PHVMPPGAVRPPAMYAPQPGVYLQQPGAALPPGMPRYPGPYPMMRPGFPPRPMPPVGVMP
LQRPPIIPGIRGAPPVVPPTARPPTPAVTPPDKPPTAVYVGKIAPTVDNEFLLSLLRLCG
PVKSWKRTQNPSSGKPVSFGFCEFESAEGILRATRLLNKLSIDGQELVVNINDATKEYLK
KHVEEKKKAQEKTKEMEDGGGSGTTAVTGNELSKPVSDETETGTGDAGDKGNEENPKKFG
IVTEEDSKADKDVAEKISSMIEEWLKTRPPPPPPPVEQSADISSKHKNGEYSVDVTKNDS
EDKSGTGSDKRAVNETERIETGSPDKRKERERDKEKRDKDKELERHERERERERVRRDRE
KDIKYKEVERLYKERLKEWEFRE
NT seq
1511 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtagcgcctcctcccgacggcctagacccgccgccggcgacgccccccacc
gccgccgcgggcaccccgccgctcgccgtccccgccaccaacacgccgccgaaccccgcg
acgactcccaccccactcacgccaaaccctaaccctagcccgacgctgcccccgcccccg
atgtccacccctccggtggtcgcgccgccgatgcactccttcgccccctcgttccgcccg
ctcggcgccccgcccccgcccccgccaccgcagcaggtgcaggtgcaggtgccgccgcag
tacggcggcgtgccgaacccggggtacccgatggcgcagcagatgcagccgccgggggtc
ccccacgtgatgccgccgggcgccgtgcggccgcccgccatgtacgcgccccagcctggc
gtgtacctccagcagccaggcgctgctcttcctcccggtatgcctcgctaccctggacca
taccctatgatgcgccctggctttccgccacgcccgatgcctccagttggtgttatgccg
cttcaacgaccaccaattattcctgggattcgtggtgcacctcctgtggttccccctact
gcccgaccacctactccagctgttacacctcctgacaaaccgccaactgcagtttatgtt
ggcaagattgctccaacagtggacaatgaatttctcctttcacttctccgtctttgtggc
cctgtcaagagttggaagcgtacgcagaatccaagtagtggaaagcctgtatcatttggc
ttttgtgagttcgaatctgccgaaggcatccttcgtgcaacgcggctgctcaataaattg
agcattgatggacaagaacttgtggttaacattaatgatgccaccaaagagtacctgaag
aaacatgttgaagaaaagaagaaagcacaagaaaagaccaaagaaatggaagatggaggt
ggtagtgggactactgctgtcactggaaatgaattgtcaaagcctgtttctgatgaaaca
gagacagggacaggagatgctggtgataagggcaatgaagaaaatcctaagaaatttggg
attgttacagaggaagattctaaggctgataaggatgttgctgaaaaaattagtagtatg
attgaagagtggttaaagactagaccaccaccgccacctcccccagttgaacaatctgct
gacatctcttccaaacacaagaatggagagtatagtgtagatgtgacaaaaaatgattct
gaagataagagtggcactggaagtgataaaagggcagttaatgagaccgaaaggatagaa
actgggtctcctgataagaggaaggagagagagcgtgataaggagaagcgggacaaggat
aaagaacttgaaaggcatgaacgcgagcgagagcgagaaagagtcaggagagacagagag
aaggatattaagtataaagaagtggagaggttgtacaaggagcgcctcaaggagtgggaa
tttagagagag
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