Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0427500
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Entry
Os08g0427500 CDS
T02163
Name
(GenBank) DNA repair protein Rad4 family protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Os08g0427500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os08g0427500
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
Os08g0427500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
BAF23757
RAP-DB:
Os08g0427500
UniProt:
Q0J5K8
LinkDB
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Position
8
Genome browser
AA seq
880 aa
AA seq
DB search
MRTRSQRDGHHAAAAAETPPSGASGGSGGDVARGGGTPRRRRRASPAAEKGKSPAKVEME
SALEDKSKNVKVHAEGYDDAGMTRFGRDGSEKNSLEEEDPDAADMDWEEGIVFAAEHDEC
YSHELGETVTVEFTDLPSSTEKKTARRLTAEEKELAELVHRVHLLCLLARGRVIDKACND
PLIQASILSVLPQHVLRNSVDTPILKANELRSLVSWFHNTFSVIAQSDDKGSFKSNLAFA
LQSYVGTAEEVCALSVALFRALNLTARFVANLDVAGLKPDTKSMGTSNQDEPRLCTKALP
SSSFVAGHNEYNNLSPVLSQNNTEGSINTTPKQVKVQGCRKSLSKKLSKCKANQRDSSAS
LSKDSSSSSQYPSTSSNAEVPRRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSL
LSSTPPLKKLRKSEEASSNSSVVWSRNRAPLFWAEVFCGGEASSGRWVHVDVANDIIDGE
QKVEAASAVCRKPLRYVVAFAGNGAKDVTRRYCLQWHRIVQGRVNPEWWKSVLAPLERLE
LAATNNTEEMELQTRALTEPLPTNQQAYKDHHLYALEKWLHKNQVLHPKGPVLGFCKGNP
VYPRSCVQTLQSRHGWLREGLQVRENELPAKVVTRPKRTFNSQSIQSNSNSNEDGLKPTM
ELYGKWQLEPLQLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRIFQVAKRLGIDF
APAMVGFDYRNTRCLPVFDGIVVCSEFKNTILEAYAEQEERRQAEERKQEEAQALIRWYQ
LLCSVVTTQRLKDSYKAPSSEHGPEGPSQDVSQQKGTRKSRSSETKTRSSRLQADRPFDS
PFPVHDHEHEYPEEDQSFDEETFVRTKRCPCGFSIQVEEL
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccaggagccagcgcgacggccaccacgccgccgccgctgccgaaaccccgcct
tccggggcaagcggaggatcaggaggggacgttgcgaggggcggtggcacgcctcgccgt
cgccggagggcttcgccggccgcggagaaagggaagtcgcccgccaaggtggaaatggaa
tcggcattggaggataaaagtaaaaacgttaaggtccatgcagagggttatgacgatgcc
gggatgacgaggttcggtagggatggctctgaaaagaacagtttggaggaagaagatcca
gatgcagctgatatggactgggaagaagggattgttttcgcggcggaacacgatgagtgt
tattcccatgagcttggagagacagtcaccgttgagttcactgatctaccctcttccact
gaaaagaagactgctcggaggcttactgctgaagaaaaggagttggctgaactcgtgcac
agggtccatttgctttgcctactagcaaggggtagggtaattgacaaggcttgcaatgat
cctctgattcaggcttcaattctctctgttttaccacaacatgtactacggaattctgta
gacactccaattctgaaagctaatgaactgcgtagtcttgtgagctggttccacaacact
ttcagtgtaattgcacaatccgacgacaaggggtcttttaaatcaaatttggcatttgct
cttcaaagttatgtaggcactgctgaagaggtttgtgcactttcagtggcattgtttagg
gctctcaacttaacagctaggtttgttgcgaatctggatgttgctggtctcaagcctgac
actaaatcaatggggacatcaaatcaggatgaacctaggctttgtacaaaggcgctgcca
tctagttcttttgttgcaggccataatgagtataataacctttcacctgtcctgtcacaa
aacaatactgaaggtagcatcaatacaactccaaaacaagtcaaagttcaaggctgcagg
aaaagtttgtctaaaaaattgtcgaagtgcaaggcaaatcagagagatagctctgcatca
ctatcaaaagatagctcatccagcagccaatatccttccacctccagtaatgctgaagta
ccaagacgaaaaggggatttggaatttgagttgcagctggaaatggctcttttagcatct
gcagctaaaagtcaagacaacaagctagcaactcaattaaatcagtcaactgatagctta
ctaagttcaactccaccattgaagaagttacgaaaaagtgaagaagcctcaagcaactcg
agcgtggtttggtcgaggaatagagcaccgttattttgggctgaggtattttgtggtggc
gaggcatcgtctggaagatgggtccatgttgatgttgcaaatgatattattgatggtgaa
caaaaagtagaagctgcttccgctgtttgcaggaagcctttgagatatgttgttgccttt
gctggaaatggtgctaaagatgtgaccagaaggtattgcctgcaatggcacagaattgtt
caggggagagtgaatcctgagtggtggaaaagtgttttggcacccctagagcgtcttgaa
ttggcagcaacgaacaacactgaagaaatggaacttcagaccagggccttaacagagcct
cttcctaccaatcaacaggcctacaaagaccatcatctatatgcccttgagaagtggctt
cacaagaaccaagttcttcaccccaaaggcccagtgcttggcttctgtaaagggaatcct
gtttatcctagatcttgtgttcagacactgcaatcaagacatggatggttgcgggagggt
ctgcaagtcagagaaaatgagttgcctgcaaaggtcgtgacgcggccaaagaggactttc
aattctcagtcaattcaatctaatagtaatagtaatgaagatgggcttaagccaaccatg
gaactatatggtaaatggcagctggaaccgctgcaacttccccatgcagtaaatggtatt
gtaccaaagaatgagcgtggtcaagtcgatgtgtggtcagagaaatgtcttccgcctggt
actgtacacctgaggttaccaagaatattccaggtcgcaaagagacttggaattgatttt
gccccagccatggttggatttgattatcgaaacacccggtgccttccagtttttgatgga
attgttgtctgttccgaattcaaaaatactatcttagaggcatatgcagaacaagaggaa
cggagacaagccgaggagaggaagcaggaggaagctcaggctcttattaggtggtatcag
ctgctgtgttccgtcgtaaccacacagcggttgaaggactcttacaaagcaccctcatca
gagcacggaccagaaggaccatcccaagatgttagtcagcagaagggcacacgcaaaagt
cgaagctcggaaacgaagactcgctcaagcagactacaggcggaccgaccatttgattct
ccttttcctgtccatgaccatgagcatgagtatccagaggaagatcagagcttcgacgaa
gagacgtttgtgaggacgaaacgctgtccatgtggtttttcaatccaagttgaggaattg
tag
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