Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0520300
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Entry
Os08g0520300 CDS
T02163
Name
(GenBank) Similar to Oligouridylate binding protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os08g0520300
03041 Spliceosome [BR:
dosa03041
]
Os08g0520300
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Os08g0520300
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
Os08g0520300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_10
RRM_5
Motif
Other DBs
NCBI-ProteinID:
BAF24180
RAP-DB:
Os08g0520300
UniProt:
Q6YZW2
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All DBs
Position
8
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AA seq
447 aa
AA seq
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MNGAGGNHQQQQQQQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISN
GNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDR
RSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSA
YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNAE
EKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHR
HFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGNKPTPP
GTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQHGLAGQVSA
GLLAAGSQALYDGYPNQSSAQQLMYYN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccggcgggaaccaccagcagcagcagcagcagcagcagcggctcaggcag
cagcagcagcagcaggccctcctgatgcagcaggcgctgcagcagcagcagcagtaccag
tccggcgtcctcgccgccgccgccgcggcggccatgacccagatggagcctatttcaaat
ggcaatcttccaccagggtttgatccatccacatgtcgcagtgtgtatgttgggaatgtg
caccctaatgttactgagagccttctaatcgaagttttccagagttctggccttgtggaa
agatgcaagctcatccggaaggagaagtcttcctttggttttgttgactattatgatcgg
aggtcagcggctcttgcaataatgacccttcatggtcgtcacatatgtggccaagcaatc
aaggtgaactgggcttatgcaagtacacagagggaggatacatctgggcatttccatatt
tttgttggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagca
tatccttcttgttctgatgctcgagtcatgtgggataacaaaaccggacgctccagaggt
tatggttttgtctccttccgtaatcaacaggaagctgagactgctataactgaaatgact
gggaaatggcttggaagcagacaaataaggtgtaattgggcaacaaagaacaatgcagaa
gagaaacaagaaactgacaaccataatgcagttgtactaacaaatggtagttctagtaat
ccaggaatggaggcaagtcaggacaccggaagtaaagagaatccagagaacaaccctgat
tgtactacggtgtatgttggcaaccttggacatgaggttaaccgagatgagcttcaccgc
cacttctataatttaggtgttggggctattgaggaagttcgcgttcaacaggataaagga
tttgggtttgtgagatacagtaaccatggcgaagcagcattggctattcagatggccaat
ggattggtagtgcgtgggaagccgatcaagtgctcatggggcaacaaacctaccccacct
ggtacatcctccaagccattgccaccgccacttccttcatatcaacccgtaccaatggca
ggtgtgccacaaggtttctcggcagctgatatcgtagcatatcagaggcaacttacctta
agccaggtcgcagctgggcagattgctggccagcatggccttgcaggtcaggtatccgca
gggcttcttgctgctggctcccaggccctctacgacgggtacccgaaccagtcatcagcg
caacagcttatgtactacaactag
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