Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0529000
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Entry
Os08g0529000 CDS
T02163
Name
(GenBank) Similar to Auxin efflux carrier component 1 (PIN-FORMED protein) (AtPIN1)
KO
K13947
auxin efflux carrier family protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os08g0529000
Transporters [BR:
dosa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Os08g0529000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-ProteinID:
BAF24231
RAP-DB:
Os08g0529000
UniProt:
Q6ZIB5
LinkDB
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Position
8
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AA seq
370 aa
AA seq
DB search
MIGWGDVYKVVGAMAPLYFALGLGYGSVRWWRFFTAEQCAAINTMVVYFSMPFFTFDFVV
RTDPFAMNYRVIAADAVSKAIAIAAMAAWARTRCGCAAAKAGAQSWSITGFSLAALNNTL
VVGVPLLDAMYGRWAQDLVVQIAVVQSMVWFPLLLMAFELRKAWVVGGGGGVGPAVMSSS
SPPEKQSDVEMNGAVVAAPGGGGGVRLPFWATARTVGLKLARNPNVYASVLGVVWACIAY
RWHLSLPGIVTGSLQVMSRTGTGMSMFSMGLFMGQQERVIACGAGLTALGMALRFVAGPL
ATLVGAAALGLRGDVLHLAIIQAALPQSIASFVFAKEYGLHADVLSTAVIFGTLISLPIL
IAYYAVLGFV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgataggatggggagatgtgtacaaggtggtgggggcaatggcgccgctgtacttcgcg
ctggggctagggtacgggtcggtgaggtggtggaggttcttcacggcggagcagtgcgcc
gccatcaacaccatggtggtctacttctccatgcccttcttcaccttcgacttcgtcgtc
cgcaccgacccgttcgccatgaactaccgcgtcatcgccgccgacgcggtgtccaaggcg
atcgccatcgccgccatggcggcgtgggcgcgcacgcgctgcggctgcgccgccgccaag
gccggggcgcagtcgtggtccatcaccgggttctccctcgccgcgctcaacaacacgctc
gtcgtcggcgtgccgctgctcgacgccatgtacgggaggtgggcgcaggacctcgtggtg
cagatcgccgtcgtgcagtccatggtgtggttcccgctcctgctcatggcgttcgagctc
cgcaaggcctgggtcgtcggcggcggcggcggcgtcgggccggcggtgatgtcgtcgtcg
tcgccgccggagaagcagagcgacgtcgagatgaacggcgccgtcgtcgcggcgccgggc
ggcggcggcggcgtccggctaccgttctgggcgacggcgaggacggtggggctgaagctg
gcgaggaacccgaacgtgtacgccagcgttctcggcgtcgtgtgggcgtgcatcgcgtac
aggtggcacctgagcttgccggggatcgtgacggggtcgctgcaggtgatgtccaggact
ggcacggggatgtccatgttcagcatggggttgttcatggggcagcaggagagggtgata
gcgtgcggggcggggctgacggcgctggggatggcgctgcggttcgtcgccggtccgctc
gccacgctcgtcggcgccgccgccctcggcctccgcggcgacgtcctgcacctcgccatc
atacaggccgcactgcctcaatcgattgcttccttcgttttcgcaaaggagtatgggctt
catgccgatgtactcagcacggcggttatattcggaacattgatctctctgccgattctg
attgcatattacgcggttctgggctttgtctaa
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