Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0540500
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Entry
Os08g0540500 CDS
T02163
Name
(GenBank) SAM (and some other nucleotide) binding motif domain containing protein
KO
K15190
7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os08g0540500
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
7SK RNP complex
Os08g0540500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bin3
Methyltransf_12
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_18
PrmA
Methyltransf_4
MTS
FtsJ
Motif
Other DBs
NCBI-ProteinID:
BAF24298
RAP-DB:
Os08g0540500
UniProt:
A3BVB7
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Position
8
Genome browser
AA seq
315 aa
AA seq
DB search
MATTTAPEDAPSAAKGAKGEAKRKQSNWRGGGGGGGGRGDGGQGQKRKRKEVFVYGNYRN
YYGYRIDRNVDEDPRLKIFKREWFESKDCLDIGCNQGLVTIGLAAKFKCQSILGVDIDSG
LIETANWNLRRMSRLDKVVVENTKAHKSSDSPSESCPEKVAPEISNGDISNGSHHDIFKV
VSFRRENFVDSMCTSSEQYDTIVCLSVTKWIHLNWGDDGIITLFVKIWRLLRPGGVFIME
PQPWTSYRRNRLVSEVAKENFNTILIHPDKFREILLDKIGFRSVEVVTDKLEGAVTGFDR
PIEVYHKVMGTGSSS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaccaccgcgccggaggacgcgccgtccgcggccaagggggctaaaggagag
gcgaagaggaaacagagcaactggcgtgggggaggaggaggcggcggcggccgcggcgac
gggggtcaggggcagaagcggaagaggaaggaggtattcgtctacgggaactacaggaac
tactacggctaccggattgaccgtaatgttgatgaagaccctcgtcttaaaatatttaag
agagagtggtttgaaagcaaggattgtcttgatattggatgcaaccagggtttggtaacg
attggtctagctgcgaaatttaaatgccaaagcattcttggagttgatattgattcaggt
ttgatcgaaactgccaactggaatttaagaaggatgtctcgactggataaggtggttgta
gaaaacaccaaggctcacaagtcatcagattcaccgtctgaaagctgtccggaaaaagtg
gcacctgagatatcaaatggggatatttctaatggcagtcatcatgatatttttaaagtt
gtttcttttcgtcgcgagaattttgtggacagcatgtgtacaagttcagaacagtatgat
acaattgtttgtttgagtgtgaccaaatggatccacctgaactggggtgacgatggcata
attactttatttgtgaagatctggagacttctaagaccgggtggagtttttattatggag
cctcaaccttggacctcatataggagaaacagattggtttcagaggttgccaaagagaac
ttcaataccatcctaatacatccagataaattccgggagatacttctagacaagatcgga
ttcaggtcggtagaggtggttacggacaaactggagggcgctgttactggttttgaccgc
ccaatcgaagtttaccacaaagtgatgggaactggatcaagttcttga
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