Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0548300
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Entry
Os08g0548300 CDS
T02163
Name
(GenBank) Zinc finger, RING-type domain containing protein
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os08g0548300
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os08g0548300
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Os08g0548300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-ANAPC11
zf-RING_UBOX
Prok-RING_1
zf_RING_Vps8_fungal
zf-C3H2C3
zinc_ribbon_16
zf_RING_Vps8
zf-RING_Vps41
Prok-RING_4
PHD
PHD_NSD
RINGv
Motif
Other DBs
NCBI-ProteinID:
BAF24348
RAP-DB:
Os08g0548300
UniProt:
Q6Z9B8
LinkDB
All DBs
Position
8
Genome browser
AA seq
305 aa
AA seq
DB search
MDAAKDTTAAAADQNPTPNPPTAAAPPDDSAAAAAAGRRPFTSLTQEEADLALARVLQEQ
ERAYMMLSAHHGGDYAASDGGSYEFDEEGEGSDFEDEDGDGDGDGEALDEDEEVADADAD
AAGDPAELDPARYEDDEAFARALQDAEEREVAGRLMALAGLSDWRVMDHDDDDVDDDDDE
DDDDDDDDEDEDGDDPQDAWEDVDPDEYSYEELVALGEVVGTESRGLSADTLASLPSITY
RAQDKQDGNMEQCVICRVEFEEGESLVALPCKHSYHSECINQWLQLNKVCPMCSAEVPTS
QDTRA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccaaggataccaccgccgccgccgccgaccaaaaccctacccccaaccct
cccaccgccgcagctccacccgatgactccgcggcggcggcggcggcggggagacggccc
ttcaccagcctcacccaggaggaggccgacctcgccctcgcccgcgtcctccaggagcag
gagcgggcgtacatgatgctcagcgcgcaccacggcggcgactacgcggcctccgatggt
gggagctacgagtttgacgaggaaggggaggggagcgattttgaggacgaggatggggac
ggggacggcgacggggaggcgctggatgaggacgaggaggtggccgacgcagacgcagac
gccgccggtgacccggctgagttggaccccgcgcggtacgaggacgacgaggccttcgcg
cgggcgctgcaggacgccgaggagcgcgaggtcgccggccgcctcatggcgctcgcgggc
ctcagtgattggcgagtgatggaccatgatgatgacgatgttgatgatgatgatgatgag
gatgatgatgatgatgatgatgatgaagatgaagacggggatgatccacaggatgcatgg
gaagatgttgatccagatgaatattcttatgaggagctggttgcattgggtgaagtagtt
ggtacggaaagcagaggcctctctgctgatacacttgcttcattaccttcaataacttat
cgagcacaagataagcaagacggcaacatggaacaatgtgttatttgccgtgtggaattt
gaggaaggtgaatcattggttgcacttccttgcaagcattcataccattctgaatgcata
aaccaatggctgcaattaaataaggtatgccctatgtgcagtgctgaagttcctacttca
caggacacccgggcatga
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