Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0554100
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Entry
Os08g0554100 CDS
T02163
Name
(GenBank) Similar to MYST1 protein (Fragment)
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Os08g0554100
Enzymes [BR:
dosa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Os08g0554100
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Endotoxin_C
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
BAF24378
RAP-DB:
Os08g0554100
UniProt:
A0A0P0XIS5
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Position
8
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AA seq
658 aa
AA seq
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MGKLSCKNLLPCCMGHPPATSPAGATAGVSVKVSDRYVEIKNGIFELTLSNPDGIVTGVR
YNGVDNLMEILNKEDNRGYWDLVWSKLGERTGIFDVIKGTEFRIIYQDENHAEVSFVRTW
DPSLEGKAVPLNIDKRFIVLRGCSGFYTYGIYEHQEGWPGFSLGETRVAFKLRKDKFHYM
ALADDRQRIMPMPEDRVPPRGQQLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQYNNVH
GWISFDPPIGFWQITPSDEFRTGGPVKQNLTSHVGPTMLAMFLSGHYAGDDLTPKFLTGE
YWKKVHGPVFMYLNSSWDGSDPTLLWEDAKVQMMIEKESWPYCFALSDDFQKTEQRGCIS
GRLLVRDRYLDDADLYATSAYVGLALPGDVGSWQRECKGYQFWCRAEDDGSFCIRNIVAG
DYNLYAWVPGFIGDYKLDAKLTISSGDDIYLGDLVYEPPRDGPTMWEIGIPDRSASEFFV
PDPNPNYVNRLYINHPDRFRQYGLWERYAELYPDGDLVYTIGQSDYTTDWFFAQVNRRTD
QSTYQPTTWQIKFNLDSVSPNSTYKFRVALASSANAELQVRFNDQDRTAPHFTTGLIGKD
NTIARHGIHGLYWLFNIDVSGAWLVQGMNTIYLKQPRNQSPFQGLMYDYLRMEGPSGS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacttagctgcaagaacctattgccgtgctgcatgggccatccaccggcgacc
tcaccggccggcgccaccgccggcgtcagcgttaaggtcagcgaccgatatgttgagatt
aaaaatggcatatttgagcttacgctgtccaaccccgacgggatcgtgaccggcgtccgg
tataatggtgtggacaacttgatggagattcttaacaaagaagacaacagagggtactgg
gaccttgtttggagtaaactgggagaaagaactggcatatttgatgtaataaaagggaca
gagttccgaatcatatatcaggatgaaaaccatgcagaggtctcgttcgttagaacatgg
gatccttctctggaaggcaaagctgttcccttgaacattgataagaggttcattgtactc
cggggctgctcaggattctatacctatggaatctatgagcatcaggaagggtggcctggt
tttagcctgggagagaccagggtggccttcaagcttcggaaagacaagtttcattacatg
gcattagctgacgacaggcagagaataatgccgatgcctgaagaccgagtgccgccccgg
ggacagcaattagcataccctgaagctgtccttcttgtggacccaataaatcctgaccta
agaggagaggttgatgataaataccaatactcctgtgaagaccagtataacaatgtccat
ggatggatatcattcgatcctccaattggcttctggcagatcactccgagtgacgagttc
cgaacaggaggtcccgtcaagcagaacttgacctctcatgttgggccaactatgctggct
atgtttcttagcggtcattatgctggggatgaccttacacccaagttcttgactggtgaa
tactggaaaaaggtccatgggcctgtcttcatgtaccttaactccagttgggatggaagt
gacccaactctactctgggaggatgcaaaagttcagatgatgattgagaaagagagctgg
ccgtactgttttgcactgtcagatgattttcagaagactgagcaaagaggttgtatctct
ggtagattactcgtccgagacaggtatttagatgatgcagatctttatgctacatcagct
tatgtaggcttagctctaccaggagatgttggatcctggcaaagagagtgcaagggatac
caattctggtgtagggcagaagatgatggaagcttttgcataagaaacattgtagctgga
gactacaacctttatgcatgggttccaggatttataggggactacaaactggatgctaag
ctaaccatatcttcaggggatgacatttatctgggtgaccttgtgtatgaaccaccaaga
gacggtcccacgatgtgggagatcggaatacctgatcgatccgcctctgaattctttgtt
ccagaccctaatcccaactatgtgaataggttgtatatcaaccatcctgacagatttagg
cagtatggactttgggaaagatatgcagagctgtatccagacggtgatctggtatacaca
attggccagagcgactataccaccgattggttctttgctcaagtaaacagaagaactgat
cagagcacctaccagccaaccacatggcaaataaagttcaatcttgacagtgtcagtcct
aacagcacatacaaattcagagtggctcttgcatcatccgcaaatgccgagttgcaggtt
cgtttcaacgatcaggacagaactgctcctcacttcacaactgggttgattgggaaagac
aacacgattgcgaggcacgggatccatgggctgtactggctgttcaacatcgatgtgagt
ggagcttggcttgttcaagggatgaacaccatctacctgaagcagcccaggaaccagagt
ccatttcagggactgatgtatgactacctgagaatggaaggtccttctggcagctaa
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