KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os08g0558600
Entry
Os08g0558600      CDS       T02163                                 
Name
(GenBank) Longin domain containing protein
  KO
K08515  vesicle-associated membrane protein 7
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04130  SNARE interactions in vesicular transport
dosa04142  Lysosome biogenesis
dosa04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    Os08g0558600
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    Os08g0558600
   04142 Lysosome biogenesis
    Os08g0558600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dosa04131]
    Os08g0558600
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os08g0558600
Membrane trafficking [BR:dosa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    Os08g0558600
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Os08g0558600
SSDB
Motif
Pfam: Synaptobrevin Longin SRP-alpha_N
Other DBs
NCBI-ProteinID: BAF24409
RAP-DB: Os08g0558600
UniProt: B7ECT4
LinkDB
Position
8
AA seq 241 aa
MNGNKQSLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPPNTSKSTYSCDGHTFNFL
VDRGFVFLVVADEAVGRSVPFVFLDRVKEDFMQRYGSSIDEEGQHPLADDADDDDFLLED
RFSIAYNLDREFGPRLKDHMLYCINHPEEISKLSKVKAHLTEVKGIMMDNIEKILERGEK
IELLVGKTETLQSQADSFHRHGRELRRKMWLQNLRFKLMVGGAVAALILFLWLIICGGFK
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaacggcaataagcagtccctgatatacagcttcgtggccaagggctccgtcgtgctg
gccgagcacaccgccttctccggcaacttcagcaccatcgccgtccagtgcctccagaag
cttccccccaacacctccaagtccacctactcctgcgatggccacaccttcaacttcctc
gtcgaccgcggcttcgtgtttctcgtcgttgcggatgaggccgttggaaggagcgtgccg
tttgtgttcctagatagggttaaggaagacttcatgcagcggtatggctccagtatcgac
gaggagggtcaacacccgctcgccgatgatgcagatgatgatgacttcctcttggaggac
cgatttagcatcgcctacaatcttgaccgggaattcggaccgaggctgaaggatcacatg
ctgtattgtattaatcatccagaggaaattagcaagctctccaaagtgaaagcacacctc
acggaggtcaaagggattatgatggacaacattgagaagatattggaacgtggagagaag
attgagcttttggtcggcaagactgaaaccttacaatcacaggctgacagcttccacagg
catggaagagagctcaggcgtaagatgtggcttcagaacctgaggtttaagttgatggtg
ggtggtgctgttgcggcgttgattctcttcctctggctgattatttgcgggggcttcaag
tgctag

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