Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0241100
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Entry
Os09g0241100 CDS
T02163
Name
(GenBank) The stop codon is not identified.; WD40-like domain containing protein
KO
K11274
chromosome transmission fidelity protein 4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09g0241100
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
Os09g0241100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_Gbeta
EIF3I
Beta-prop_RIG_2nd
eIF2A
Beta-prop_WDR35_TULP_N
Ctf4_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
WD_LRWD1
WD40_MABP1-WDR62_1st
Tricorn_2nd
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_ELP1_1st
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
SGL
Motif
Other DBs
NCBI-ProteinID:
BAF24559
RAP-DB:
Os09g0241100
UniProt:
Q0J3A6
LinkDB
All DBs
Position
9
Genome browser
AA seq
935 aa
AA seq
DB search
MIFQLRNAIVKHIFLLSLFLKISLPYLRHCGREIRCIFPAVLHQKLPAKRPFPRGGTRQN
PPKCLQPKPHPAYRQSLETPNKFLNTRRHHSFSLVGEESLVVVVGVTMKGRAVKLREAHK
AGSPVFCSVAWGQGGQHVVTASAADVAILIHDAAAVAAAGGRSSGSAAAAALSTIRLHKD
GVTALAVAPGSGASLASGSIDHSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAA
GDDDGIKLIATIDNTISKVLKGHKGSVTGLSFDPRNDYLASIDTFGTVIFWDLCTGTEAR
SLKRIAPTFGSDHSINNALCWSPDGQFLAVPGLRNNVVMYDRDTGEEVFTLKGEHEQPVC
SLCWSPNGRYLVTAGLDKQVLIWDVKSKQDVERQKFDERICSLAWKPESNAVAVIDVTGR
FGIWESVIPSTLKSPTEGAPDLNSTKVPLFDDEDDEERPSTSGGLDDDDDDESLGELGPF
NHKRLRRKSTYHDHSNGDSEDEDLILQMESRKRMKDTHRDNKEVADKAIGDSATSVRLVT
ARMQTAFQPGSTPPQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRVPSMTDY
FGFTMAALNESGSVFANPCKGDKNMSTLMYRPFSSWAGNSEWSMRFEGEEVKAVAVGVGW
VAAVTTLNFLRIFTEGGLQMHILSVGGPVVTAAGHGDQLAIVSHASDCLSSGDQVLDVKV
LKISECAQSLSSRLVLTPASKLSWFGFSENGELSSFDSKGILRVFSGQFGGSWIPIFSSI
KARKSEDESHWVVGLDANNIFCILCKSPESYPQVMPKPVLTILELSFPLASSDLGANSLE
TEFMMRKLHLSQIQKKIEEMAALGLDTIALDDEAFNMEAALDRCILRLISSCCNGDKLVR
ATELAKLLTLEKSMKGALMLVTRLKLPILQERFSA
NT seq
2807 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcagctaagaaatgcgatagttaaacatatattccttttgagtttatttttg
aaaatatccctaccttacctccgccactgcggccgtgaaattcggtgtatttttcccgcg
gtactccaccaaaagcttcccgccaaacgtcctttcccgcgcggggggacgcgccaaaac
ccaccaaaatgtctgcaaccaaaaccccaccccgcgtatcgtcaatctctggaaacccct
aacaaattcctgaacacccgccgccaccatagcttcagcctcgtgggtgaagaatctctc
gtcgtcgtcgtcggtgtcaccatgaaagggcgcgcggtgaagctccgagaggcgcacaag
gccggctcgccagtcttctgctccgttgcgtggggccaaggcgggcagcatgtcgtcacc
gcatccgccgccgacgtggccatcctcatccatgacgccgctgcggtcgccgccgccggt
ggccggagctcgggctccgcggctgcggcggcgctttccacgatccggcttcacaaggat
ggcgtcacggcgctcgccgtcgcgccgggctccggcgcgtcgctggcgtccggctccatc
gatcactccgtcaagttctgttctttcccagagggggtgttccagagcaatatcgcccgg
ttcaccctgccgatccggtcactggccttcaacaagaaggggactctgctggcggcggcc
ggagacgacgacggcatcaagttgattgccaccatcgacaacaccatctccaaagtgctc
aagggccacaagggatcggtaaccgggttgtctttcgatcccagaaacgattatttggca
tcaattgacaccttcggcacagtcatcttctgggatctctgcacggggactgaagcccgt
agtctgaagcggattgcgccgacatttggttcagaccactcaatcaacaatgccctgtgc
tggagccctgatgggcagttccttgctgttccgggattgaggaataatgtggtcatgtat
gatagggacaccggtgaggaggtgttcactctgaaaggggagcatgagcaaccagtgtgt
agtctctgctggtctccaaatgggaggtacctagtcactgctggattggataagcaggtt
ctgatctgggatgtgaagtcaaagcaggatgttgagaggcagaagttcgatgaaaggata
tgtagcttggcttggaaacctgaaagtaatgctgtagcagtgatcgacgtaactggcaga
tttggcatttgggaatcggtcatcccgtcgactttgaaatcgcccacagagggtgcacct
gacctgaactctactaaggttcctttgtttgatgacgaggatgatgaggagaggccgagt
acctctggtggactggatgatgatgatgatgatgaaagtcttggtgaattaggtccattc
aaccacaagagattgaggaggaagtcaacctatcatgatcactcaaatggagatagtgaa
gatgaggatctgatacttcagatggagtcacgcaagagaatgaaagatacacatagagat
aacaaggaggttgctgataaggcaataggtgattcagcaacttcagtaagactggttaca
gcaagaatgcaaactgcatttcagcctgggtccacaccacctcaacctggcaagcgaaat
ttccttgcctacaatatgcttggaagtatcactactatcgaaaatgaggggcattcacat
gtagaggtagacttccatgacaccggaagaggtcctagagttccttcgatgactgattat
tttggtttcacaatggctgcactgaatgaatcaggaagtgtctttgcaaatccatgcaag
ggtgacaagaatatgagcactcttatgtaccgccctttcagtagttgggcaggcaacagt
gagtggtcaatgaggtttgagggagaagaagtgaaggctgtggctgttggtgttggatgg
gtcgctgcagttacaactttaaattttctgcgcattttcacagagggagggttgcagatg
catatcctctcagtcggtggcccagtggttactgcggcaggccatggagatcagctagcg
attgtgtctcatgcttcagattgtctttcatcaggagaccaggtgctggatgttaaagta
ctgaagatatctgaatgtgctcaatcattgtccagccgacttgttttaactcctgcctct
aaattatcttggtttggtttcagtgagaatggtgaacttagttcctttgattccaaggga
atactgagggtcttttctggtcaattcggtggaagctggattccaatatttagttcaatc
aaggcaagaaaatccgaagatgaaagccactgggtggtgggcttagatgctaataatata
ttctgcattctatgcaagtccccggagtcctatccacaggtgatgcccaaacctgttttg
acaatacttgagctgtcatttcctcttgcatcatctgaccttggtgccaatagtttggaa
actgaattcatgatgaggaaactgcatctctcacagattcaaaagaaaatagaagaaatg
gctgctttgggtctggacacgattgcattagatgatgaagcattcaacatggaggctgca
cttgaccggtgcatcttgaggctcatctccagctgctgcaatggtgataagcttgtacga
gctaccgagcttgcaaaattactaacactggagaagtcaatgaagggagcattgatgctt
gttacacgcttaaaacttcccatattgcaagaaaggttcagtgccat
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