Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0246200
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Entry
Os09g0246200 CDS
T02163
Name
(GenBank) RpoT1 (T7 bacteriophage-type single subunit RNA polymerase)
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os09g0246200
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Os09g0246200
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
Os09g0246200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-ProteinID:
BAF24573
RAP-DB:
Os09g0246200
UniProt:
Q84LK6
Q0J392
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All DBs
Position
9
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AA seq
1017 aa
AA seq
DB search
MPSSPTPATAPISCSPSPPLHLHLTARRQTLAPPMWRRLPARRLASALLSSSAPLPHPLH
RSLLLLLPAASQRLAPSQTLPRFASSSAAVAAESVSSEEVDELHHAIGEIARGDPSVSAP
APAAGQEGHRRRSGRGKHSAEAMAVPAAGQEGHRRRSGRGKHSAEAMAVHGVGYHKYAML
RRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELV
GERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVR
IHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKKQDNS
KPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEMRTVAREQQKSSRR
YGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYVMRTHGARQQR
DAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVALPEK
PDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGR
AYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFT
ENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGS
CNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVVEIMKNDALKDPATDPDAARA
RLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERDMICDDSELFSASCYAAKVTL
TALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVL
TLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVHDSYWTHACDVD
TMNKILREKFVELYDTPILENLLESFEKSFPELKFPPLPERGDFDLTDVLGSPYFFN
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgccctcctccccaactccggccaccgcaccaatctcgtgttcgccatctcctcctctc
cacctccacctcaccgcccgccgccaaaccctagcgccccccatgtggcgccgcctcccc
gcccgccgcctcgcctccgccctcctctcctcctccgccccgctgccccaccctctccac
cgcagcctcctcctcctcctccctgccgcctcacagcgtctcgcgccgtcgcagacgctg
ccgcggttcgcgtcctcctccgccgccgtcgccgccgagtccgtctcctccgaggaggtc
gacgagttgcaccacgcgatcggggagatcgcccgcggggacccgagcgtctccgccccg
gctccggcggcggggcaggaggggcataggaggaggtccgggagagggaagcactcggcc
gaggctatggcggttccggcggcggggcaggaggggcataggaggaggtccgggagaggg
aagcactcggccgaggctatggcggtgcacggggtcgggtaccacaagtatgcgatgctg
cgccggcggcagatccagattgagacggaggcgtgggagcaggccgccgaggagtaccgc
gagctgcttgctgacatgtgccagcagaagctggcgcccaacctgccctatgtcaagtcg
ctctttcttggctggttcgagccactgcgagaccagatcattgccgagcaggagctcgtg
ggtgagcgcggcgcgcgggcctcccatgcccgctatttcaacatgctcccggctgatatg
atggccgtcatcaccatgcacaagctcatgggtctactcatgaccggtagcggcgatgga
agtgtccgagtcatccaggctgcgtgccagatcggcgaggcaatagaacatgaggttcga
atccacaaatttctagagaagacaaagaaaaaaagcaataaagaaatggataatgaagaa
gaaggaggtgattcagacattgccaaagaacaagagcgtctaagaaagaaagtcactgat
ctgatgaaaaagcaaaaaatacggcaagtaagaaatatagtaaagaagcaagataactcc
aagccatggggtcaagatgctcatgcaaaagttggtagtcgtttaattgagcttatgatt
gagacagcctacatacaaccacctgctagccaatcagcagatggtccacctgatatccgt
cctgctttcacacatgaaatgagaactgtggcaagagagcaacagaagagtagtcggcga
tatggtgtgatcaagtgtgatccgctggtccggcaagggcttgatagaacagcaaagcat
atggtcataccttatatgcctatgttaattccgcctatcagttggactgggtatgacaag
ggtgcacatttatttttaccatcctatgtgatgcgcacccatggagctagacaacagaga
gatgctgtcagaagagctccaagggaacaaatgcaatctgtgtttgaggccttaaatact
cttgggagcaccaagtggagggttaacaaaagagttcttagtattgtcgacagaatatgg
tcaagtggtggccggcttgctgacttggtcgatcgcactgatgttgctttaccagagaag
cctgacacagaagatgaagacaagttgaagaaatggagatggaccttgagagcagccaag
aaggaaaatagtgaaaggcactcccagagatgtgatgtagaactaaaacttgccgtagct
cgcaaaatgaaggatgaagatggtttctactatccacacaaccttgattttagaggccgt
gcttatccaatgcatccttacctgaaccacttgggttcagatctttgccgtggagttttg
gagtttgcagaaggtcgtccgcttggtaaatcaggcttgcgctggctaaagatacatcta
gcaaatttatatgctggtggtgttgacaagttatcgtatgatggccgaattgcattcacg
gagaatcacttggaggacatatttgactcagctgatagacctcttgaaggcaaacgatgg
tggcttggagctgaggatccattccaatgccttgcagtgtgcataaatctcactgaagct
ttaagaagcccctcaccagaaacgatgatctcacatattcctgtgcatcaggatggttct
tgtaatggcctgcagcactatgctgctcttggaagggataagttgggagccattgctgtg
aacttagttgccggggagaagcctgcagatgtttatactggaatagctaccagggtggtg
gaaattatgaagaacgatgcgctaaaagatcctgctacagatcctgatgcagcacgcgca
cgtctgctacttgatcaggttgacaggaaattggtaaagcaaactgtgatgacatctgtg
tatggtgtcacttatgttggagcacgtgagcaaataaaaagaagattaaaggagagagac
atgatttgtgatgattcagaactttttagtgcatcatgctatgctgctaaggttactctg
acagcacttggtgagatgttccaagctgcccgcagcattatgaactggcttggtgactgt
gccaaggtaattgcttgtgaaaatgaacctgtgagatggacaacccctcttggactccca
gttgttcaaccatatcgcaagcttgggaggcatcttattaaaacatcattacaagtcctg
actcttcaacgtgaaacagataaggttatggtgaagcggcagaggactgcttttcctcca
aatttcgtgcactcccttgacggttctcatatgatgatgaccgctgttgcttgcaaaagg
caaggactaaattttgcaggagtgcatgattcgtattggacacatgcttgtgatgttgat
acaatgaacaaaatactacgagagaagtttgtggaactctatgatacgcctatcctcgaa
aatttgttggagagctttgagaaatctttccctgaattaaaatttcctccattgccagag
aggggagattttgatctcacggatgtcctgggatccccatatttcttcaactaa
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