Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0249600
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Entry
Os09g0249600 CDS
T02163
Name
(GenBank) Conserved hypothetical protein
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Os09g0249600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os09g0249600
Spliceosome [BR:
dosa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
Os09g0249600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
DUF7696
Motif
Other DBs
NCBI-ProteinID:
BAF24587
RAP-DB:
Os09g0249600
UniProt:
Q6K476
LinkDB
All DBs
Position
9
Genome browser
AA seq
468 aa
AA seq
DB search
MGFRQDPQFAPLINLFPGTSSELTVPQKPAKAPVLRLDAQGREIDEHGNVINMTKPTNLS
TLKVNINKQKKEAFQIIKPDLDSLAKSSAHFDERMGINQNKLLRPRRPGFQFIEEGKLSR
QAELQRIKNQFGEAQAKELKVKQAQLAKAKAEVVMNPNLIEVAPGRPPKQKQKEEIPEIE
PWDAKILPSTTYDDFSMEKVNMEKITIYVEHPEPLEPPAEPAPPPPQPLKLTKKEQKKLR
TQRRLAKEKDRQEMIRQGLLEPPKPKVKMSNLMKVLGAEATQDPTRMELEIRTAAAEREQ
AHVDRNIARKLTPSERREKKERKLFEDPNTLETIVCVYRIRDLSHPQTRFKVDVNAQENR
LTGAAVIADGISVVVVEGGKKSIKRYNKLMLNRIDWAAAVDDDDDADEESDKPVNSCALV
WQGSVAKPCFTRFSVHNCRSEAAAKKVFADASVPHYWDLAVNFSEDSS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggattcagacaggatccacaatttgcgcctctcatcaatttgtttcctggtacatcc
tctgaactaactgtgcctcaaaaacctgcgaaggcacctgttctccgtcttgatgctcag
ggtagggaaattgatgaacatgggaatgttatcaacatgaccaagccaaccaatttgagc
actctaaaagttaacataaataagcaaaagaaggaagctttccaaataatcaaaccagac
ttggattcccttgcaaaatcaagtgcacactttgatgaaaggatgggcatcaaccaaaac
aagctcctccgccctagaaggcctggatttcagtttattgaggagggaaaactttcaagg
caagctgagctgcagagaattaagaatcaatttggtgaagcacaagctaaagaacttaaa
gtaaaacaagctcaacttgcaaaggcaaaggcagaagtagtcatgaacccgaacttgatt
gaagttgctcctgggaggcctccaaagcaaaagcagaaggaagagattcctgaaattgag
ccatgggatgcaaaaattttaccttctacaacatacgacgatttctccatggagaaggtt
aatatggaaaaaatcactatatatgtagagcatccagagccactggagccaccagctgag
cctgcaccaccaccgcctcagccacttaagctgactaagaaggagcagaagaaactcaga
acacaaaggcgccttgctaaagagaaagacaggcaagaaatgatcaggcaaggcctcttg
gagccaccaaagcccaaggtcaagatgagcaatcttatgaaagtactaggagctgaagct
acacaggatccaacacgtatggagttggaaatacggactgctgctgcagagcgtgagcag
gctcatgtagatcgcaacattgctcgcaagctcactccatcagagcgccgtgaaaagaaa
gagaggaagctttttgaagatcctaacacattggagactatagtttgtgtgtacagaatc
agagacctgtcacatccgcagacacgttttaaggtggatgtaaatgcacaagagaaccgt
cttactggtgctgcagtcattgcggatgggatcagtgttgttgtcgttgaaggagggaag
aagtcaatcaaaaggtacaataagctgatgctgaaccgtattgactgggctgctgcggtt
gatgatgatgatgatgctgatgaggaatcagacaagcctgtgaatagctgtgcattggtc
tggcaggggagtgtggcaaaaccctgctttaccaggttcagtgtacacaattgccgtagt
gaggctgctgccaagaaggtgtttgcagatgcttcagttccacactactgggacctggct
gtcaatttctcagaagattcatcttga
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