Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0267500
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Entry
Os09g0267500 CDS
T02163
Name
(GenBank) WD-40 repeat containing protein
KO
K16547
protein NEDD1
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09g0267500
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dosa04812
]
Os09g0267500
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
Os09g0267500
Microtubules and associated factors
gamma-tubulin ring complex
Os09g0267500
Cytoskeleton proteins [BR:
dosa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
Os09g0267500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_IFT122_1st
PROPPIN
PEP5_VPS11_N
WD_LRWD1
Shugoshin_N
WD40_like
Beta-prop_DCAF4
bZIP_2
Motif
Other DBs
NCBI-ProteinID:
BAF24636
RAP-DB:
Os09g0267500
UniProt:
Q0J329
LinkDB
All DBs
Position
9
Genome browser
AA seq
774 aa
AA seq
DB search
MGFVDPAAPLLATCGGDTVKLFDVTVESGDPCVLAYTPAPAHPVNAVRWNHTNLIVASAG
DDKKISLWHKKGQNVGQLPTSTVDRGDDIEECIYSISFSNKGSRYLCSGGSGHIVRIWDL
QRKRCIKWLSGHTDTITGVMYNCKDEHLASISMKGDLILHNLASGARAAELSDPNGQVLR
VLDYSRNSRHILVTAGDDGSVHLWDTTARTPKVSWLKQHSAPISGVCISPSSDKIIATVG
LDKKLYTLDSGSRRPTHTIPHEAPFSSLAYNDDGTILAAGTNSGRVVFYDVRGKPQPLTI
LRAYNSSEAVTGLCWQRSKPVIVNENSSSEVALLGGSSEESVLMPDPLPSATSAFHSGGV
IPNLRSSLAANPSGFLSTSTSSTVEETPYRTRPLSGGPLSKLQAPRSNFSLKDDMDVFSP
LVDVQPFTPSSGSLWDDHGSDETKKDDKLGEKKLSTTRKFPFIEDNNEPHPISDWKSISN
SRQDDASSATTTSMPSWKSELSITSPETATGNALSDRLTHRQQVSRFGASAFQTGSFAFA
GLQDSAPTTGNSLKGSLTSNILMNLQNKGVLSNARPSLDISTSSLQSSLSSGLMAKTMPP
VNSDQPGAAQSSSQWRPSTYTDRVSTSSVFSEGLASAFGSPKSKKTGAETKDELLSSLLS
RQEAAAASSSANLVANNGVVPPQLPTSGLSADQQGASSFSLQYVQRMLEESLGSVQKSIH
EDVRNLHIELLRQFHMQEMEMSGVLNLVLEKLEGLTKEVQQLRRENQQLRQQLL
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtggatccggcggcgccgctgctggccacgtgcggcggcgacaccgtcaag
ctgttcgacgtcacggtcgagtccggcgacccctgcgtcctcgcctacacccccgcgccg
gcacaccccgtcaacgccgtccgctggaaccacaccaatctaattgtagcaagtgctggg
gatgataaaaagatctcattatggcacaaaaaaggtcaaaatgtaggacagctaccaaca
tcaactgttgatcgtggggatgacatagaggagtgcatatattctatcagttttagcaac
aagggttcacgatatctttgctctggtgggagtggccacatcgttaggatatgggatttg
cagcggaagaggtgcatcaaatggttaagtggtcacactgacaccattacgggtgtgatg
tataattgcaaagatgaacatttggcttcaatcagcatgaagggggatcttattctccat
aatcttgcttctggagcacgtgctgctgaacttagtgacccaaatgggcaggttttgaga
gtccttgactattcacgtaatagtaggcatatattggtgacagcaggagatgatggttct
gtgcatctctgggatacaactgcaagaactccaaaggtctcatggctgaagcaacattct
gcacccataagtggtgtctgtatttcgccctccagtgataagataattgctacagttggc
ctggacaagaagttgtacacactcgattcagggtcaagacgaccaacacacactattcct
cacgaggcccctttctcatcattggcatacaatgatgatggtacaatattggctgcaggc
acaaatagtggtcgtgtggtattttatgatgttcgaggaaaacctcagccattgactatt
cttcgtgcatacaatagctcagaggctgtgacaggtttatgttggcaaaggtcaaagcct
gtcattgttaacgagaatagttcttctgaggttgctcttctgggtgggagtagtgaagaa
tctgttctcatgccagatcccttgccttcagcaacttcagcttttcattctggaggtgtc
atcccaaatcttcggtcttctttggctgcaaacccaagtggatttctttctacctctacc
tcgtccactgtggaggaaactccatacaggacacggccattgtctggtggaccattatca
aagctacaggctcctcgtagtaacttcagtctaaaggatgatatggatgtattctctcca
cttgtagatgttcaacctttcacaccgtccagtggcagcctgtgggatgaccatgggagt
gatgaaacaaaaaaggatgataaacttggagagaagaaattgtcgacaactagaaaattc
ccgtttattgaagacaataatgagccacatccaatctcagactggaagtcaatttccaat
tcaagacaggatgatgcctcatcagcaaccactacatccatgccatcatggaagagtgaa
ctatctatcacttcacctgagacagcaactggaaatgcattatccgataggttaactcac
cgccaacaagtctcgcgctttggggcttcagcctttcagactggcagctttgcatttgca
ggcttacaagattcagctccaacaactggtaactcactgaaaggttctctaacaagtaat
attttaatgaacctacaaaacaagggtgtcttgagcaatgcacgcccttccctggacata
tcaacttctagcctccagagttcactgtcctcaggcttaatggccaagactatgccacca
gtaaactccgaccagcctggagcagcacaatctagttctcaatggagaccctcaacatat
actgatagagtgagcacatcgtctgttttcagtgaaggattagcatcagcctttggttca
ccaaaatcaaagaagactggggcagaaacaaaagatgaactgctcagcagtcttctatca
agacaagaagcagcagctgcctcttcatctgccaaccttgtagcaaacaatggggtggtg
ccaccacaattgccaacatcaggtttgtcagctgatcaacagggagcttcatccttctca
cttcagtatgtgcagcggatgcttgaagaatccctagggtctgttcagaagtccatccat
gaggacgtgagaaatctgcacatcgaacttctaagacagtttcacatgcaagagatggaa
atgtcgggcgtgttgaacctggtcttagagaagttggaaggccttacaaaggaagtgcag
cagctaagaagggagaaccaacagctccggcagcagctcctctaa
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