Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0279600
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Entry
Os09g0279600 CDS
T02163
Name
(GenBank) Similar to Topoisomerase 6 subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dosa03032
]
Os09g0279600
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Os09g0279600
DNA replication proteins [BR:
dosa03032
]
Prokaryotic type
DNA Topoisomerases
Os09g0279600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAF24675
RAP-DB:
Os09g0279600
UniProt:
Q6H442
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Position
9
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AA seq
696 aa
AA seq
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MDDDAGDGAASGGTKRKVTAASSSAAAKGKAAGKGKAASKASALATAKESSLLKQKSPAE
FFAENKNIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEIIIEEITKSKFNTMIGL
VDRQRIDEELYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKEAPAARGKGRGEAAF
FRVTCKDNGRGMPHDDIPNMLGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLPIEI
KSSMKGQNFISFCLLDIDIHKNVPHVHLHEKRENKDRWHGAELQVIIEGNWTTHRSKILH
YMRQMAVITPYAQFLFRFLSDSPDKNLTIQFARRTDVMPPIPLQTKHHPSAVDLLLIKRL
ISETTKQNLLQFLQHEFVNISKSHAERLIGEMGPDFSAKTTVKSLTSQQLVRIHQLFRQA
KFDDPSGNCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGKDVK
HGLNIFRYANRIPLLFEQGADVITRTALKRINWSSYKINQQQDKIGVFVSIVSTKIPFKG
TGKEYIGDDITEIASAVQSALKQCCLQLKSKIVKKLQARERQDRKRNLNRYIPDVARAIM
ETLGEIADESPPKRPRYDKEDEELLEKVNSEEVTEMTFRDCLTQHVEQVDYEMALEYAMQ
SGVSEEPREALYLNSLEGSYKFIDFQSPVFVFRFIP
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgctggcgacggcgccgctagcggcgggacaaagaggaaggtcactgcg
gcgtcgtcgtcggcggcggcgaaggggaaggcggcggggaaagggaaggccgcctctaag
gcgtcggcgttggccacggccaaggagagcagcctcctcaagcagaagtcgcctgctgaa
ttcttcgcggagaacaagaacatcgcggggtttgacaatcctggaaagtcactgtacaca
acgatgcgggagttagttgagaatgcccttgattcagccgagtccatctctgagctccct
gacatagaaattataatagaagagatcacgaagagcaagttcaacacaatgatagggcta
gttgatcgacagcgtattgatgaagagctctatgatgactttgaatcggctaaggctcgt
gagaaacgccttgccaaagaagcacgcttccaagaaacacaagccaaaaatgctgctctt
gggaagaaggttaaggaggctccagctgctcgagggaaaggtcggggtgaggctgcattt
tttagggtgacttgcaaggataatggtcgaggtatgccacatgatgatatcccaaatatg
cttggtagagtgttatcgggcacaaagtatggtttgaggcaaacacgtggaaaatttggt
cttggtgctaaaatggcacttatatggtcaaagatgagcacaggccttcctattgagatt
aagtcatcaatgaaaggccagaattttatttcattttgtcttcttgatatcgatattcat
aagaatgtccctcatgttcatttacatgagaaaagggagaataaagatcgctggcatggg
gcggagcttcaagttataattgaggggaattggacaactcatcgttcaaagatactacat
tacatgcgtcagatggctgtcatcacaccatacgctcaattcctttttagatttctctca
gactcacccgacaaaaatttgacaatacagtttgcacggaggacagatgttatgcctcct
attcctcttcaaactaagcatcatccttctgctgttgatttactgctgataaagcgctta
atatcagagactacaaagcaaaaccttttgcagttcctccaacatgagtttgtgaatatt
agcaaatctcatgctgaacgtttgatcggggagatggggcctgatttcagtgcaaaaacg
acagttaagagtcttacatcacagcaattagttcggatacatcagttatttcggcaggca
aaatttgatgatcccagtggcaattgtcttagtcctgcaggtgaatacaatttacgtcta
ggtatcataaaagagctgcaccctgatctagttgctacgcatgcaagcagcccacaggtt
tttgaaggtcatccattcatcgttgaagctggaataagtattggtggaaaagatgttaaa
catggtctaaacatttttagatatgcgaaccgaatcccacttctctttgaacaaggtgct
gatgtcatcacaagaactgctttaaaaagaatcaattggagcagctacaaaataaatcaa
cagcaggacaagattggtgtctttgttagcattgtaagtacaaagataccttttaaagga
actggaaaagagtacattggggatgacataaccgaaatagcatctgctgttcagtcagcc
cttaagcagtgttgtcttcaactgaagtcaaagatagtaaagaaactacaggctcgtgaa
cggcaggacaggaaaaggaacctaaacagatacattcctgatgttgcgagggcaattatg
gagactctgggagaaattgcagatgagtctcccccaaagaggccacgttatgataaggaa
gatgaggaactccttgagaaagtaaactctgaggaggtgacagagatgacctttagggat
tgcttaacacaacatgttgaacaggttgattatgaaatggcattggagtacgccatgcag
agtggagtaagcgaggaacctcgtgaagcattatatttaaactcccttgaaggatcttac
aagtttatcgatttccagagccctgtttttgtgttcagatttattccttga
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