Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0416800
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Entry
Os09g0416800 CDS
T02163
Name
(GenBank) Similar to CCR4-NOT transcription complex subunit 7 (CCR4-associated factor 1) (CAF1) (BTG1 binding factor 1)
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Os09g0416800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os09g0416800
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Os09g0416800
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Os09g0416800
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-ProteinID:
BAF25095
RAP-DB:
Os09g0416800
UniProt:
Q6EQZ6
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All DBs
Position
9
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AA seq
280 aa
AA seq
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MATPAAEKPDGVEIREVWEDNLEAEFAVIREIVDDFPYVAMDTEFPGVVCRPLGTFKSNA
DFNYATLKANVDMLKLIQLGLTFSNEHGGLPSLGPEGRPCVWQFNFRGFDPRTDVAAADS
IDLLRRSGIDFTRHSADGADARRFAELLMSSGVVMNSEVRWVTFHSGYDFGYLLKLLTGT
YLPDTITGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL
LTALSFKKLKEAYFNGLTEKYAGVLYGLGTEGGETSSAAH
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgccgagaagcccgacggggtggagatccgcgaggtgtgggaggac
aacctcgaggccgagttcgcggtgattcgggagatcgttgacgacttcccgtacgtcgcg
atggacacggagttcccgggcgtcgtctgcaggccgctcgggacgttcaagtccaacgcc
gatttcaactacgcaacgctcaaagccaacgtcgacatgctgaagcttatccagcttggt
ttaaccttctcgaatgagcatggtgggctcccgtcgcttggccccgagggtcgaccttgt
gtttggcagttcaactttcgtggcttcgatccccggaccgacgtcgctgctgcagattcc
attgacttgctccggcgcagcggtattgacttcacccgtcactcggctgacggcgctgat
gctcgccgcttcgctgagcttctcatgtcgtcgggcgttgtgatgaactctgaggttcgc
tgggttacgttccatagcggatacgactttggctacttgctcaagttgctcaccggcaca
tacctgccagacacgataaccggattcttcgacctcatcaggatatatttccccgtcgtg
tatgacatcaagcacttgatgcggttctgcaacagcctccatggtgggctgaacaagctt
gccgagctgcttgatgttgagcgcgttggaatttgtcatcaggctggttccgactcgctg
ttgaccgcgctgtcattcaaaaagctcaaggaagcatacttcaatgggttaaccgagaag
tatgccggtgtgttgtatggtcttggcacagaaggtggggagacctcctctgctgctcac
taa
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