Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0482680
Help
Entry
Os09g0482680 CDS
T02163
Name
(GenBank) Similar to Ribonuclease Z, chloroplast precursor (EC 3.1.26.11) (RNase Z) (tRNase Z) (tRNA 3 endonuclease) (Zinc phosphodiesterase CPZ)
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os09g0482680
Enzymes [BR:
dosa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Os09g0482680
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Os09g0482680
Prokaryotic type
Os09g0482680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
BAH94627
RAP-DB:
Os09g0482680
UniProt:
B7EIC7
C7J6W7
LinkDB
All DBs
Position
9
Genome browser
AA seq
365 aa
AA seq
DB search
MAATSLLSLPSLRLTHRLLVPASSSAPASRSQFQTLAAKKAAVATGTGEGGGGGRGAGGG
LLSVLDRAMADEEEYRRARAQVHRKGVEVEGYAIEGVSVGGHETCVTVPSLNVAFDIGRG
PLFAVSQDYLFITHAHLDHIGGLPMYIATRGLYNLKPPVVFVPPCIKDDVEDLLQIHRRM
SQVDLKVELVALDLGETFEIRNDLVARPFETHHAIPSQGYVIYSVRRKLKKQYAHLKGNQ
IMKMKQSGAEITDTILYPEVAFTGDTKSDFILDPRNADALRAKVLITEATFLDDQIDVDH
AREHGHMHLSEIMEHSQWFRNKAIVLTHFSNRYSLEDIRQAVSKLQSKLSSKVVALTEGF
KSDYR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacctccctcctctccctcccctcgctccgcctcacccaccgcctcctcgtc
cccgcgtcgtcgtccgccccagcctcccgctcccagttccaaacgctcgccgcgaagaag
gcagccgtcgccacgggcaccggcgagggcggcggcggggggcgtggagcgggcggcggg
ctgctgtcggtgctcgaccgggcgatggcggacgaggaggagtaccgccgggcgcgcgcg
caggtgcaccgtaagggcgtggaggtggaggggtacgccatcgagggggtctccgtcggc
gggcacgagacctgcgtcaccgtgccgtccctcaacgtcgccttcgacatcggccgcggg
ccgctcttcgccgtgagccaggactacctcttcatcacccacgcccacctcgaccacatc
ggtggtctcccaatgtacatagcaactcgtggcctctataatttgaagccacccgttgta
tttgtaccaccatgtatcaaggatgatgttgaggatctacttcaaatccatcgtagaatg
agtcaagtcgaccttaaagtggaattggttgcgcttgatttgggggagacatttgaaata
cgtaatgaccttgttgccagaccatttgagactcaccatgctatacccagccagggttat
gtcatctactctgttcggagaaagttgaaaaaacagtatgctcacttgaagggtaatcaa
ataatgaaaatgaagcaatcaggcgctgagattacagatactatactatatccagaagtt
gcctttacaggtgacacaaagtctgattttattcttgacccacgaaatgcagatgccctg
agagcaaaagtccttataactgaggcaaccttcctagatgaccaaattgatgttgatcat
gctcgggagcatggccacatgcatctctctgagataatggagcactcccaatggtttaga
aacaaagccattgtactgacacatttctcaaatcgatatagtcttgaggatattagacaa
gctgtttccaaactacagtcaaagttatcttcaaaggttgttgcactgacggaaggcttc
aaatctgactatagatag
DBGET
integrated database retrieval system
