KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0491756
Entry
Os09g0491756      CDS       T02163                                 
Name
(GenBank) U2 snRNP auxiliary factor, small subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os09g0491756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os09g0491756
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    Os09g0491756
 Complex B
    Os09g0491756
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-ProteinID: BAH94645
RAP-DB: Os09g0491756
UniProt: Q9ZQW8
LinkDB
Position
9
AA seq 290 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP
GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED
QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL
RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDHDDYYRGGSHDYYRGGSR
RSSERHRSSYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQV
NT seq 873 nt   +upstreamnt  +downstreamnt
atggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagccg
tcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcacccct
ggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgaggat
ttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacgtg
tgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggaggat
caggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatcatt
gtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagagaac
agctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacctg
aggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggccggagc
cgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcatcgcggtcc
agggaccacgacgattactaccgtggaggtagccacgattactaccgtggaggtagccgg
aggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcggcacagg
tccaggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcag
tggaaccgtgaaagggaggctgcacaagtgtga

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