Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0498600
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Entry
Os09g0498600 CDS
T02163
Name
(GenBank) KH domain containing protein
KO
K21444
poly(rC)-binding protein 3/4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os09g0498600
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
Os09g0498600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
MOEP19
KH_5
Motif
Other DBs
NCBI-ProteinID:
BAF25481
RAP-DB:
Os09g0498600
UniProt:
B7ECX2
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Position
9
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AA seq
398 aa
AA seq
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MPDYHARNYSSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIK
IIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQH
IGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITG
RIRDVIIPMKPHPGGGMPPYPPGGNAPPHHPRQEPAPPHPTGGMPPYPMPSFRADRPMGP
FDMVDHRPPPPHSMEHMGADRMPYSYGCEQGGGPRPFLDQPSPSAWAPEAPNSEAPRNMP
ETVPPADFRKGAVAGTNQVATPSNATEVIIPRKYIGFICGANGSDLAEIKKMSGATITVH
HPKPGDANALVIICGDPDQTKKAQSLLHAFIFCGLYQT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattatcatgcaaggaattattcaagtaatatggctgcccccggtcctagattc
tttgttgaacaagagatagtcttcaggatgatatgtctcaatgaaatggtggggagcata
atcggaaaaggtggttcaactattcgcgcattacaaagtgaaactggtgcttcgattaag
attatagagcctaattctgattcagaagaacgtgtaattgtgatatctgcacatgagaat
tctgagatgatgcattctccagctcaggatgcagtacttcgggtgcattctagaatctcg
gagtcatcgatggataaaagttctgctgtaactgcaagacttcttgtaccatcacagcat
attggttgcttactaggcaaaggtggttctatcatcgcagaaatgagaaaaataacagga
gctggtatccgaattttcgggaatgaacaaattccaagatgtgcacaacgaaatgatgag
ctagttcaggtcacaggtagttttcaatccattcaggatgcattgcttcatatcactgga
aggattagagatgtcatcattcccatgaagccacatccaggtggaggtatgcccccatat
ccacctggtggaaacgctccacctcaccacccaagacaagaaccagcaccaccgcatccc
actggaggcatgcctccatatcctatgccttctttcagagctgatcgtcctatgggtcct
tttgatatggtcgatcatcgaccacctccccctcattcaatggagcacatgggtgctgat
aggatgccctactcatatggttgtgaacaaggaggtggtcctcgaccttttctggaccag
ccatcaccaagtgcctgggctcctgaggcaccaaacagtgaagctccaagaaatatgcct
gagacagtaccacctgcagatttcagaaagggagcagtggcaggaacaaatcaagtggct
acaccatctaatgcaactgaagtcattattccccgcaagtacataggttttatttgtgga
gccaatggcagtgaccttgctgagataaagaagatgtcaggtgccacaattactgtccat
catccaaaacctggggatgcaaatgcattggttattatatgtggggatcctgaccaaact
aagaaggcacaaagcctacttcacgcgttcatcttttgtggtctctaccaaacttag
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