KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0504700
Entry
Os09g0504700      CDS       T02163                                 
Name
(GenBank) Zinc finger, RING-type domain containing protein
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dosa04121]
    Os09g0504700
Enzymes [BR:dosa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     Os09g0504700
Ubiquitin system [BR:dosa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    Os09g0504700
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_10 zf-rbx1 RING_XB3-XBAT31 Zn_ribbon_6 zf-RING_4 Prok-RING_4 zf-RING_6 Rtf2 zf-ANAPC11 Sina_RING zf-P11 zf-Nse DUF1272 TRAF3_RING FYVE
Other DBs
NCBI-ProteinID: BAF25510
RAP-DB: Os09g0504700
UniProt: B7EMU6 A0A5S6R9Z1
LinkDB
Position
9
AA seq 191 aa
MSTVSGTRRAPRRQSQDGPGDKVVVNLDAISSPVVGSRRAVPTSTGARASPIDVEALDDE
VQTLSASQVPPPRRNRRTRRQPVAVVDLEVDASREGNKRQRVAPVIHCLSPERGEGSSLK
TSNEPPKAKEPVFNCPVCWNKLEEPSTTICGHIFCTTCIKQAIQIQKKCPTCRKSLRANN
FHRIYLPNSDS
NT seq 576 nt   +upstreamnt  +downstreamnt
atgagtactgtcagcggcactcggcgtgccccaaggaggcaatcacaagatggtcctggt
gataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcgcgcg
gtgccgacctccactggtgcgcgcgcctcccccattgatgtggaagctctggatgatgaa
gtgcagacattgtccgcttcgcaagtgcctcctccgagaaggaaccggagaactaggagg
cagcctgtggcagtagttgatctggaagtagatgctagccgggaagggaacaaacgtcaa
agggttgcacctgttatacactgcctctctccagaaaggggagaagggtccagcttgaag
actagcaatgagcctcctaaggcaaaggaaccggtttttaactgtccggtgtgttggaac
aagttggaggagccctccacaacaatttgcggccatatcttctgcacgacatgcatcaag
caagccatccagattcagaagaaatgccctacttgcagaaagagtctgagggcgaacaat
ttccaccgtatttaccttccaaactctgatagttaa

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