Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0520700
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Entry
Os09g0520700 CDS
T02163
Name
(GenBank) Similar to RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os09g0520700
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09g0520700
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Os09g0520700
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-60S particles
Helicases
Os09g0520700
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
Os09g0520700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
SR-25
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BAF25616
RAP-DB:
Os09g0520700
UniProt:
Q650T9
LinkDB
All DBs
Position
9
Genome browser
AA seq
696 aa
AA seq
DB search
MPSLPVAAAEPMAVDESASKKSKRKLKAAEVEVEASSRKKEKKEKKRKAKEPSPSSSSSS
EEEERSSTSSDEPAPAAKKAKKEKTKEKVVVEEEEEDDDEGELTASGDEDPADPNALANF
RISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNG
THKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAI
RKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTK
VQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIP
DIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVILAGFRSGKFLVLV
ATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEPRYKFNVNRI
ERESGVKFEHISAPQPTDVAQSAGTEAAEAISSVSDSVIPVFREQAEQLLNSSGMSAVDL
LAKALAKAVGYTDIKKRSLLSSMDNHTTLLLQTGRSVYAAGFVLSTLKRFMPEERLADVK
GITITADGTGAVFDVPSAEVEDYIQGAQNAAMVTVEEVKQLPPLQEREQSGGSRGGGRFG
NRRFSGGGGGRGGGGRGFGGGRGRGGGGGNRFNKRY
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctccccgtcgccgccgccgagccgatggccgtcgacgagtcggcctccaag
aagtcgaagcgcaagctgaaggcggcggaggtggaggtggaggcctcgtcgaggaagaag
gagaagaaggagaagaagcggaaggcgaaggagccgtcgccatcgtcctcctcctcatcc
gaggaggaggagaggagcagcacgagctccgacgagccggcgcccgccgcgaagaaggcg
aagaaggagaagacgaaggagaaggtggtggtggaggaggaggaggaggacgacgacgaa
ggggagctcaccgccagcggcgacgaggatcccgccgaccccaacgcgctcgccaacttc
aggatctcggagtcgctcagggagaagctcaagtccaaggggatcaaggcgctgttcccc
atccaggccaccaccttcgatctcgtcctcgacggccacgacctggtcggccgcgcgcgc
actggacagggaaaaacattggcttttgttctaccgatacttgagtcattagttaatggg
acacacaaggcatccagaaggactgattatggcaggcctccaactgttttggttctgttg
cctaccagagagctagccaagcaggtgcacacagactttgcattttatggtgcaacattt
gggctatctgcatgctgcgtatatgggggttctgattatcgttctcaagaaatggcaatc
agaaagggggttgacattgttgttggaactcctggtcgtgtgaaggactttgttgaaaag
ggaaccctcaattttaggtctttgaaattccgtgtccttgatgaggctgatgagatgctt
aatatgggcttcgttgatgatgttgagcttattcttggcaaagttgaagatgttacaaaa
gtacagacacttctcttcagcgctactataccagagtgggtgaagaagctctccttgaga
tttctcaaatctggaaagaaaacggttgatcttgttggagatgagaaattgaaagctagt
gcatctgttaggcatcttgctcttccttgtaaccgtgctgcaagggctcaagttattcca
gacatcatccgatgctatagccgtggaggccggaccattatctttaccgagacaaaagaa
tctgcatcagacctctctggtttgattgctggatcacgtgccttgcatggtgatgttgct
caagctcagcgtgaagttattcttgctgggttcaggagtggcaagtttttagttttggtt
gctacaaacgtggctgcacgagggctggacattaatgatgtgcagcttatcattcagtgt
gaacctccacgtgatgttgaagcctacatacaccggtcaggtcggactgggagagcaggc
aatactggtgttgctgtcatgctttttgaacccagatataagttcaatgtgaacagaata
gaaagggagtctggggtcaaatttgaacatatctctgcaccacagccaactgatgtggca
caatctgctggtactgaagcagcagaagccatttccagtgtttcagacagtgtcattcct
gtttttcgggagcaagctgagcaactattgaactcttccgggatgtctgcagttgatcta
ctagccaaagcacttgcgaaggcagttggctacacggacataaagaagagatccttgctg
tcttctatggacaaccacactacattacttcttcaaactggtcgatcggtgtatgcagca
ggatttgttctttctactttgaaaaggtttatgccagaagagagacttgcagatgtaaag
ggtataaccatcactgctgatgggacaggtgctgtatttgatgttccttcagcagaggtt
gaagactatattcaaggtgcacagaacgctgccatggtgactgtcgaggaagtgaaacaa
ttgccacccttgcaagagagggaacagtctggtggcagccgaggtggaggaaggtttgga
aacaggagattttctggtggtggtggtggccggggtggaggcggcagagggttcggtgga
ggcagaggcaggggaggtggcggcggcaacaggtttaacaagaggtactag
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