Oryza sativa japonica (Japanese rice) (RAPDB): Os09g0568200
Help
Entry
Os09g0568200 CDS
T02163
Name
(GenBank) The start codon is not identified.; Transcription factor CBF/NF-Y/archaeal histone domain containing protein
KO
K02326
DNA polymerase epsilon subunit 3 [EC:
2.7.7.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03030
DNA replication
dosa03082
ATP-dependent chromatin remodeling
dosa03410
Base excision repair
dosa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Os09g0568200
03410 Base excision repair
Os09g0568200
03420 Nucleotide excision repair
Os09g0568200
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os09g0568200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dosa03032
]
Os09g0568200
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09g0568200
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os09g0568200
Enzymes [BR:
dosa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Os09g0568200
DNA replication proteins [BR:
dosa03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
Os09g0568200
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
Os09g0568200
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
Os09g0568200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
TAF
Motif
Other DBs
NCBI-ProteinID:
BAF25883
RAP-DB:
Os09g0568200
LinkDB
All DBs
Position
9
Genome browser
AA seq
134 aa
AA seq
DB search
GEGGGSHSQPEKQPGQAAAAASMAEAEVEELPKAIVRRLVKEKLAQVAAGGAEVIVNKDA
MSAFAESARIFIHYLSATANDMCKESKRQTINADDVLKALDEMEFPEFVEPLNTSLQGQY
CLLPFSVWYYKCQM
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
ggggaaggtgggggatcccattcccaacctgagaagcagccgggccaagcggcggcggcg
gcgtccatggcggaggcggaggtggaggagctgcccaaggccatcgtgcggcgcctagtg
aaggagaagctcgcccaggtcgccgccggaggggccgaggtcatcgtcaacaaggacgcc
atgtccgccttcgccgagagcgcccgcatcttcatccactacctctccgccactgccaat
gacatgtgcaaagaatcaaagaggcagacgatcaacgctgatgatgtcctcaaggcactc
gatgaaatggagttccctgagtttgtagagccccttaatacttctttgcaaggtcaatat
tgtctacttccattcagtgtttggtattacaaatgtcaaatgtag
DBGET
integrated database retrieval system
