Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0426500
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Entry
Os10g0426500 CDS
T02163
Name
(GenBank) TRAF-like domain containing protein
KO
K10523
speckle-type POZ protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os10g0426500
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
Os10g0426500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BACK_BPM_SPOP
BTB
MATH
TRAF-mep_MATH
BACK
Motif
Other DBs
NCBI-ProteinID:
BAF26557
RAP-DB:
Os10g0426500
UniProt:
Q0IXK8
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All DBs
Position
10
Genome browser
AA seq
369 aa
AA seq
DB search
MSHGALSPTTAAAVSASAIVANTSRGYHYLKIDGYSHTKATPTGEALFSCQFAVGGHRWR
ICYYPNGNVLEAADYISMFLVLDEIVVRNVKAQFQICFAGQVEKQAPSLAWKTVRAFNKQ
TSSSSSWGYPKFIRREDLEKSEYLRDDSFTIRCDIIVVDNYRAEDASSGAAGFVSVPPSN
LHSHLGDLLKNEKGTDVVFEVAGQRFTAHRCVLAARSPVFNAELFGMMMESDTTTNDAIQ
IGDMAAPVFKALLHFVYTDSLPETMEEREDTMCEHLLVAADRYNLERLKLICEERLCKYI
GIGTVMDILALADQHHCKGLKKACFDFLRSPANLSAVTGSESFEHLSRSFPSLMKELVDI
LGTSHNYAW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagccatggagcattgtctccgacaaccgccgccgccgtgtccgcgtccgccatcgtc
gccaatacctccagagggtaccactacctcaagatcgacggctactcgcacaccaaggcc
acgcccaccggcgaggccctcttctcctgccagttcgccgtcggcggccaccgctggcgc
atctgctactaccccaacggcaatgtcctggaggccgcggactacatctccatgttcctc
gtgctcgacgagatcgtcgtcaggaacgtcaaggctcagttccagatttgcttcgccggc
caggttgagaagcaggcgccgtccttggcatggaagaccgttcgagcgttcaataagcaa
acttcttcgtcttcttcctggggttaccccaagttcatcaggagagaagatttggagaaa
tcggagtatctcagggacgattcgttcaccatccggtgcgacatcatcgtggtcgacaat
taccgtgccgaggacgccagcagcggcgctgccggcttcgtctccgtgcccccgtccaac
ctccatagccacctcggcgacctcctcaagaacgagaagggcaccgacgtagtgttcgag
gtcgccggccagaggttcacagcgcaccggtgcgtgctcgcggcacggtcaccggtcttc
aacgcggagctctttggcatgatgatggagagcgacaccaccaccaacgatgccatccaa
atcggtgacatggcggcgccggtgttcaaggcgttgctccacttcgtgtacaccgactcg
ttgccggagacgatggaggagagggaggacaccatgtgcgagcatctgctcgtcgcggcg
gatcggtacaacctggagaggctgaagctgatctgcgaggaaagattgtgcaagtacatt
ggcataggcacggtgatggacatcctcgcgctggctgatcaacaccactgcaaggggctg
aagaaggcgtgcttcgattttctcaggtcgccggcgaacctgagtgccgtcaccggcagc
gaaagcttcgagcatctgagcaggagcttcccctctcttatgaaggagcttgttgacatt
ctaggaacttcacataattatgcttggtga
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