KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0457000
Entry
Os10g0457000      CDS       T02163                                 
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
  KO
K12831  splicing factor 3B subunit 4
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Os10g0457000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dosa03041]
    Os10g0457000
Spliceosome [BR:dosa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    Os10g0457000
 Complex B
    Os10g0457000
 Complex C
   U2 SnRNP specific factors
    Os10g0457000
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5 PH_26
Other DBs
NCBI-ProteinID: BAF26673
RAP-DB: Os10g0457000
UniProt: Q7XDP6 Q0IX92
LinkDB
Position
10
AA seq 355 aa
MTTRIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC
NRPITVSYAYKKDTKGERHGTPAERLLAANNPGSQKNRPHTMFASGPPTQGLANGAPVPR
PFSNGAVPPQIQHVRPPPPPMQQFPPMQMNGQPVWPPQNTQLPPHMPPQMHYRPAVRPPP
PNMMPPPPLGMVRPPPPPSSMPAPPMWRPPPPPQQAGGMPPPPMSMPPPPPPPSG
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgacgacgcgcatcgcgcccggcgtgggcgccaacctgctcgggcagcactcggcggag
cggaaccaggacgccaccacctacgtcggcaacctcgacccccaggtttcggaggagtta
ctatgggaattatttgtgcaagcaggccctgttgttaatgtctatgtccccaaagacaga
gtaacaaatctacaccagggctatggatttgtagaattcagaagtgaagaagatgcagat
tatgctattaagattttgaatatgatcaagctatatggaaaaccaataagagtaaacaag
gcttcacaagacaagaagagccttgatgtaggggcaaatctttttattggcaatctcgat
ccggatgttgacgaaaagctcctgtacgataccttcagtgcgtttggagtgattgtgact
aatcccaagataatgcgagatcctgaaactggaaattcacgaggctttggctttgtgagc
tatgactcctttgaatcatctgatcaagctatagaggcaatgaacaaccaacatctatgt
aaccggccaattactgtctcttatgcctacaagaaagacacaaaaggagaacgccatggc
acacctgcagagaggttgctagcagcaaataaccctggttctcagaagaataggccacac
actatgtttgcaagtggcccgcctacgcaagggcttgcaaatggtgcacctgtgcctcga
cctttttccaatggggcagtgccacctcagattcaacatgttcgaccgccgccacctcct
atgcaacaattccctccaatgcagatgaatggtcagcctgtttggcctccgcagaataca
cagctaccaccccacatgccacctcaaatgcattacaggcctgcagtgagaccacctcca
ccaaacatgatgccaccccctcctcttggcatggtaaggcctccgccgcctccttccagt
atgccagctccacctatgtggaggccacccccacccccacaacaagctggtggtatgcca
ccacctcctatgtccatgccaccgccgccaccaccaccttctggttaa

DBGET integrated database retrieval system