Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0462900
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Entry
Os10g0462900 CDS
T02163
Name
(GenBank) contains InterPro domain(s): IPR001844, IPR002423, IPR012723, IPR008950
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Os10g0462900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os10g0462900
03110 Chaperones and folding catalysts [BR:
dosa03110
]
Os10g0462900
03029 Mitochondrial biogenesis [BR:
dosa03029
]
Os10g0462900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dosa04147
]
Os10g0462900
Enzymes [BR:
dosa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Os10g0462900
Messenger RNA biogenesis [BR:
dosa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Os10g0462900
Chaperones and folding catalysts [BR:
dosa03110
]
Heat shock proteins
HSP60 / Chaperonin
Os10g0462900
Mitochondrial biogenesis [BR:
dosa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Os10g0462900
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os10g0462900
Exosomal proteins of other body fluids (saliva and urine)
Os10g0462900
Exosomal proteins of breast cancer cells
Os10g0462900
Exosomal proteins of colorectal cancer cells
Os10g0462900
Exosomal proteins of bladder cancer cells
Os10g0462900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAF26698
RAP-DB:
Os10g0462900
UniProt:
B9G648
LinkDB
All DBs
Position
10
Genome browser
AA seq
574 aa
AA seq
DB search
MYRAAASLASKARQAGSSARQVGSRLALSRNYAAKDIKFGVEARALMLRGVEELADAVKV
TMGPKGRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGT
TCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFVTNPK
TQKCELDDPLILIHDKKVSNLHAVVKVLELALKKQRPLLIVAEDVESEALGTLIINKLRA
GIKVCAVKAPGFGENRKANLQDLAILTGGEVITEELGMNLEKFEPQMLGTCKKVTVSKDD
TVILDGAGDKKSIEERAEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTESIIVEIPKEEKEAPAMGGMGGMDY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggccgccagcctcgcctccaaggctcggcaagccgggagcagcgctcgc
caggttggaagcaggcttgccttgagcaggaactatgctgccaaggatatcaagtttgga
gttgaggcccgtgctttgatgctgaggggtgttgaggagttggcagatgcagtcaaagtg
acaatgggtcctaagggacgcaatgtggttattgagcagagctatggttcaccgaaagtc
acaaaggacggtgtgactgttgccaagagcattgagttcaaggatagagtcaagaatgtt
ggtgcaagccttgtaaagcaggttgctaatgcgaccaatgatactgctggagatggtacc
acttgtgctactgtattgactaaagcaatatttactgaggggtgcaagtctgttgctgct
ggcatgaatgcaatggatttaaggcgtggtatttcaatggctgttgatgctgttgtaact
aacctaaagggcatggctagaatgatcagcacatcagaggaaatagctcaggtgggcaca
atatcagcaaatggggaaagggaaattggtgagcttattgcaaaggctatggagaaggtt
ggcaaggagggtgtaatcaccattgcggatggtaacaccctttacaatgagcttgaagtt
gtggaaggcatgaaacttgacagaggctacatctctccttactttgttaccaacccaaag
acccagaaatgtgaactggatgaccccttgatcctgatacatgacaagaaggtttcgaac
ctgcatgcagtagttaaagtcttggagttggctctgaagaagcaaaggcctctgctgatt
gttgctgaagatgtagagagcgaggcattgggtactctgattattaacaagcttcgtgca
ggcatcaaggtctgtgctgttaaagctcctgggtttggggagaacaggaaagcaaactta
caggaccttgcgatccttactggaggagaagtcataactgaagagctaggaatgaatctt
gagaagttcgagcctcagatgttgggtacatgcaagaaggtaactgtatctaaggacgac
actgttattcttgatggagctggagacaagaaatccattgaagagagggctgagcagatt
agatctgcaattgagctaagcacttctgattatgacaaggaaaagctacaggagcggttg
gcaaagctctccggaggtgttgctgttctaaagatcggaggagccagtgaagctgaagtt
ggtgagaagaaggatagagtgacagatgcattgaatgccactaaagctgctgtggaagag
ggtattgtaccaggtggaggtgttgcacttctttatgcatcaaaggagctggataaattg
ccgactgctaactttgatcaaaagattggtgtacaaatcattcagaatgctttgaagaca
ccggtgcacactattgcttccaacgcaggtgtagaaggggctgttgttgtcggtaagctt
ttggaacaagataacaccgaccttggctatgatgcggctaaaggtgaatatgtggacatg
gtgaaggctggtatcattgacccactaaaagtgatcagaactgccttggtggatgctgca
agcgtatcatctctgatgacaaccacggaatccatcatcgtagagatcccaaaggaagag
aaggaggcgccagcgatgggaggcatgggtggaatggattactaa
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