Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0487300
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Entry
Os10g0487300 CDS
T02163
Name
(GenBank) SMAD/FHA domain containing protein
KO
K10867
nibrin
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Os10g0487300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dosa03032
]
Os10g0487300
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os10g0487300
DNA replication proteins [BR:
dosa03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
Os10g0487300
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
Os10g0487300
BRCA1-C complex
Os10g0487300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
Nbs1_C
YNCE
Yop-YscD_cpl
Motif
Other DBs
NCBI-ProteinID:
BAF26819
RAP-DB:
Os10g0487300
UniProt:
Q7XD82
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All DBs
Position
10
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AA seq
560 aa
AA seq
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MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ
SGAPANPSYVRVVDRSKYGTFFNKVQGTQGSRLHKDEDAMLADGDTVTFGTGNATFRLSF
VPIVVFFHGKKSGRISPCLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAVLAK
KQIVLGDWFKVMAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFILGSS
EKYKFGDKLHALLESTGAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKIRGLF
PLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDHTVAA
SKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPMEEDVKVIEKT
ATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGIN
FKRFRKRGAVSGNSFKDLIPYSREPYRESDYERGTVTDFMREEKKRRQMEAIAEDLFNNA
KPKKKAAAGSSIHTMLTGRR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggcgctgacccccgtcgacacagtgcgcggggcgcagaggtgctacatcttc
gccgccgggacgtacaaggtcggccgcaaagattgcgatgtcattgttcaaacggacaca
tcgatatcgcgagtccatgcagagattgtggttgaaaagatggtggcctgggatccacaa
tctggcgcaccagctaacccttcctatgtccgtgtagttgaccgctcaaagtatgggaca
tttttcaacaaggtacagggaacacagggtagtcgccttcataaagatgaagatgcaatg
cttgctgatggggatactgtaacttttggaactggcaatgcaaccttcaggttgtcattt
gtccccatagtagtcttttttcatggaaaaaagtcagggaggattagtccatgtttgcag
gcagtaatgacatccattggtgcatatgctactcggaagtggagtgatgaatgcactcat
gtccttgttgacgagtcatgttcattgacacctgagctcctagatgcggttttggcgaaa
aagcagatcgtcctgggagactggtttaaggtgatggctgaaaagaacatacacaccgaa
atgccttcttctacacagtatattccaaagttgacccttgatgggatggagatacaggtg
gtggagatcaagctcatagagagctgccttgcaggctatacttttatcttggggtcatca
gaaaagtataaatttggagacaaactacatgctttactggaatctactggagcaaaatat
ctgcacgttgatgagttttgtgcaaacagccaggactctggagctggtgaaaatgataaa
gatattcttcttgttcctgcaaaatctcctttggaattcagtaagatacgcgggctattt
cctttgtccaagatcaccgatgtaaagctctttgctgctattttatctggtcacttagaa
gcaactgccattgaaccgccagcttacattgttgcatcctcaaattcgacggatgagact
attgtggtggactctgatgtagaaattgatactgcaacttctgatcatactgttgctgct
agcaagtctgaacatcacattgagcatatttctgatgataaaaaggaagtcgttgctata
tctgaagaagatgctgtaaatttggtggaagcaaagaccagcattaatcttcacagtgac
caggagaaagatgagattgtgaaacctatggaggaggatgtcaaggtcatagagaaaaca
gcaacaatgcgtggtttcaaagttgaaggcgaggacattcctgttatgaccaaggtgcca
aaggatgaaactttggacagcagagatgagacttgtcatgttatatatacccagaatctg
gttgtgaaaagcatccttcagtcagctcgtgccgaatccatagaaactggtggcattaac
ttcaaacgctttagaaagagaggagcagtgtctggaaacagcttcaaggacctaatcccg
tattcacgagaaccatacagagaatctgattacgagcgtggaacggtaactgacttcatg
cgagaggagaagaagcggaggcaaatggaagccattgcagaggacctcttcaacaatgca
aagccaaagaagaaggcagctgctggtagttcgattcacaccatgcttaccggccgcaga
tga
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