KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0487300
Entry
Os10g0487300      CDS       T02163                                 
Name
(GenBank) SMAD/FHA domain containing protein
  KO
K10867  nibrin
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Os10g0487300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dosa03032]
    Os10g0487300
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os10g0487300
DNA replication proteins [BR:dosa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    Os10g0487300
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     Os10g0487300
    BRCA1-C complex
     Os10g0487300
SSDB
Motif
Pfam: FHA BRCT Nbs1_C YNCE Yop-YscD_cpl
Other DBs
NCBI-ProteinID: BAF26819
RAP-DB: Os10g0487300
UniProt: Q7XD82
LinkDB
Position
10
AA seq 560 aa
MVWALTPVDTVRGAQRCYIFAAGTYKVGRKDCDVIVQTDTSISRVHAEIVVEKMVAWDPQ
SGAPANPSYVRVVDRSKYGTFFNKVQGTQGSRLHKDEDAMLADGDTVTFGTGNATFRLSF
VPIVVFFHGKKSGRISPCLQAVMTSIGAYATRKWSDECTHVLVDESCSLTPELLDAVLAK
KQIVLGDWFKVMAEKNIHTEMPSSTQYIPKLTLDGMEIQVVEIKLIESCLAGYTFILGSS
EKYKFGDKLHALLESTGAKYLHVDEFCANSQDSGAGENDKDILLVPAKSPLEFSKIRGLF
PLSKITDVKLFAAILSGHLEATAIEPPAYIVASSNSTDETIVVDSDVEIDTATSDHTVAA
SKSEHHIEHISDDKKEVVAISEEDAVNLVEAKTSINLHSDQEKDEIVKPMEEDVKVIEKT
ATMRGFKVEGEDIPVMTKVPKDETLDSRDETCHVIYTQNLVVKSILQSARAESIETGGIN
FKRFRKRGAVSGNSFKDLIPYSREPYRESDYERGTVTDFMREEKKRRQMEAIAEDLFNNA
KPKKKAAAGSSIHTMLTGRR
NT seq 1683 nt   +upstreamnt  +downstreamnt
atggtgtgggcgctgacccccgtcgacacagtgcgcggggcgcagaggtgctacatcttc
gccgccgggacgtacaaggtcggccgcaaagattgcgatgtcattgttcaaacggacaca
tcgatatcgcgagtccatgcagagattgtggttgaaaagatggtggcctgggatccacaa
tctggcgcaccagctaacccttcctatgtccgtgtagttgaccgctcaaagtatgggaca
tttttcaacaaggtacagggaacacagggtagtcgccttcataaagatgaagatgcaatg
cttgctgatggggatactgtaacttttggaactggcaatgcaaccttcaggttgtcattt
gtccccatagtagtcttttttcatggaaaaaagtcagggaggattagtccatgtttgcag
gcagtaatgacatccattggtgcatatgctactcggaagtggagtgatgaatgcactcat
gtccttgttgacgagtcatgttcattgacacctgagctcctagatgcggttttggcgaaa
aagcagatcgtcctgggagactggtttaaggtgatggctgaaaagaacatacacaccgaa
atgccttcttctacacagtatattccaaagttgacccttgatgggatggagatacaggtg
gtggagatcaagctcatagagagctgccttgcaggctatacttttatcttggggtcatca
gaaaagtataaatttggagacaaactacatgctttactggaatctactggagcaaaatat
ctgcacgttgatgagttttgtgcaaacagccaggactctggagctggtgaaaatgataaa
gatattcttcttgttcctgcaaaatctcctttggaattcagtaagatacgcgggctattt
cctttgtccaagatcaccgatgtaaagctctttgctgctattttatctggtcacttagaa
gcaactgccattgaaccgccagcttacattgttgcatcctcaaattcgacggatgagact
attgtggtggactctgatgtagaaattgatactgcaacttctgatcatactgttgctgct
agcaagtctgaacatcacattgagcatatttctgatgataaaaaggaagtcgttgctata
tctgaagaagatgctgtaaatttggtggaagcaaagaccagcattaatcttcacagtgac
caggagaaagatgagattgtgaaacctatggaggaggatgtcaaggtcatagagaaaaca
gcaacaatgcgtggtttcaaagttgaaggcgaggacattcctgttatgaccaaggtgcca
aaggatgaaactttggacagcagagatgagacttgtcatgttatatatacccagaatctg
gttgtgaaaagcatccttcagtcagctcgtgccgaatccatagaaactggtggcattaac
ttcaaacgctttagaaagagaggagcagtgtctggaaacagcttcaaggacctaatcccg
tattcacgagaaccatacagagaatctgattacgagcgtggaacggtaactgacttcatg
cgagaggagaagaagcggaggcaaatggaagccattgcagaggacctcttcaacaatgca
aagccaaagaagaaggcagctgctggtagttcgattcacaccatgcttaccggccgcaga
tga

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