Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0494500
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Entry
Os10g0494500 CDS
T02163
Name
(GenBank) The start codon is not identified.; Zinc finger, C2H2-type domain containing protein
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os10g0494500
04131 Membrane trafficking [BR:
dosa04131
]
Os10g0494500
04121 Ubiquitin system [BR:
dosa04121
]
Os10g0494500
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os10g0494500
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
Os10g0494500
Membrane trafficking [BR:
dosa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
Os10g0494500
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Os10g0494500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
BAF26859
RAP-DB:
Os10g0494500
UniProt:
Q0IWQ6
LinkDB
All DBs
Position
10
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AA seq
451 aa
AA seq
DB search
AAGGAPESVTVACPDHLVIADLAVAKSLGAVTTSAVAAARTIGRRSRRPLGERVHICCRC
EFPIALYGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFL
KRSEFDSHIPEVHANLLHNTPEREERNEPDAPNISRASGGDQRQSQMPEMSTARAPPRTG
VSPSSSSHVQDRDDRSRYHHSRDQTPQRPPMLSRPPSFHGRHSYPPGDTPSENNPPQGFD
RPYNWAHENAPGATPVRQESEHGSQDKQQMMPNAPFMFPPMPHQPNFMMPMNMNQPLMSN
TSFNYPLQQDGNPQFFSAPFQMQLPDVGLDQGSASGVQPTPPGPLSFPEGLQRPWGMGLM
GNPFQSMPLGQGMPEGAGEPQGGGGMVFLQGGFGVMPDGSMNSGIPGRDLSGQGDRGVLA
QMPMPMQMQMSLPPPPPTQPPSAGQQTFSRT
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
gccgcgggcggggccccggagtccgttacggtcgcgtgccccgaccacctggtgattgcc
gacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgc
accatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgc
gagttccccatcgccctctacggccgcctcattccttgtgaacatgctttctgtttagcc
tgtgctagaagtgattccagctgctatctttgtgatgagcgcattcagaagattcaaact
gtgaaaatgatggaagggatttttatctgtgctgcacctatgtgtctcaagtctttcctt
aagagatctgaatttgattctcatatacctgaagttcatgccaacctcctgcacaatact
ccagagagggaagaacgtaatgagccagatgctcctaacatttcccgtgcttctgggggt
gatcaaagacaatctcagatgcctgaaatgtctactgcacgtgctcctcctcggactggt
gtttcaccctcttcaagttctcatgtgcaagatcgtgatgaccgatctcgctaccaccat
tccagagaccagaccccacagaggccccctatgctatcaagaccaccatcattccatggt
cgtcactcttatccaccaggggatactccaagtgagaacaacccgcctcaaggatttgat
cggccctacaactgggctcatgaaaatgcacctggggcgactccagtccgccaagaatca
gagcatggtagtcaagacaaacagcaaatgatgcctaatgcgcctttcatgtttcctcca
atgcctcatcagccaaacttcatgatgcccatgaatatgaatcagccattaatgtccaac
acatcattcaattatcctctccaacaagatggaaatccacagttcttcagtgcccctttc
cagatgcaactaccagatgttggactggatcaaggctcagcctcgggggtccaacctacg
ccacctggtcctttaagcttccctgaggggcttcagcgtccatggggcatgggattgatg
ggcaacccatttcagtcgatgccacttggacagggaatgcctgaaggtgcaggtgaacct
cagggaggtggcggaatggttttcctgcaaggtggtttcggagtcatgcctgatggctca
atgaattcaggcataccaggtagggatctttctggccaaggtgaccggggtgttctagcg
cagatgcccatgccgatgcaaatgcagatgtcacttcccccacctccccctacacagccc
ccttcagctggacagcaaacttttagcagaacttga
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