Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0506200
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Entry
Os10g0506200 CDS
T02163
Name
(GenBank) Similar to Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase) (ValRS)
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Os10g0506200
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dosa01007
]
Os10g0506200
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os10g0506200
Enzymes [BR:
dosa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Os10g0506200
Amino acid related enzymes [BR:
dosa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Os10g0506200
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Os10g0506200
Prokaryotic type
Os10g0506200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
Motif
Other DBs
NCBI-ProteinID:
BAH94959
RAP-DB:
Os10g0506200
UniProt:
B9G6I9
LinkDB
All DBs
Position
10
Genome browser
AA seq
1042 aa
AA seq
DB search
MEKPLDEKELERKLKKDQKAREKEEKRLKAKQKEAIRLQAQAASDETKKSDKKQKKKGTP
DENPEDFVDPDTPAGQKKLLASQMAKQYNPAAVEKSWYSWWESSQYFVADATSSKPPFVI
ILPPPNVTGVLHIGHAITVAIEDAMIRWRRMSGYNALWVPGMDHAGIATQVVVEKRLMRD
RNLSRHDLGRDKFLLEVLQWKDQHGGTILKQLRTLGASLDWSRECFTMDEKRSKAVTEAF
IRLHKEGLIYRDNRIVNWDCSLRTAISDIEVDYCELTEETLLEVPGCSTLVQFGVIINFA
YPLEEGLGEIIVATTRIETMLGDTAIAVHPQDERYKRLHGKHALHPFNGRKLKIICDSKL
VDPSFGTGAVKITPAHDLDDFNTGKRHKLEFINIFTDDGNINENGGPQFEGMPRFTARAA
IIDALKAKGLYRGTENNKMRLGRCSRTKDIVEPMMKPQWFVDCSTMAKAALDAVKTKRIE
IIPIQYEQDWYRWLENIRDWCISRQLWWGHRIPAWYVTLEDDEEKDIGSYIDHWIIARNE
SDAILEAKQRYPGKNYKLDQDPDVLDTWFSSGLFPLSVLGWPDSTADLSSFYPTSVLETG
LDILFFWVARMVMMGMLLGGDVPFQKVYLHPIIRDPHGRKMAKCLGNVIDPIDVINGISL
EDLGKKLEHGNLDPSELEKAKEGQKKDFPNGIPECGTDALRFALISYTSQSDKINLDIKR
VHGYRQWCNKLWNAVRFAMNKLGDQYTPPAAIALCSMPPLCKWILSALNKAVGKTVSSME
ACKFSEATSSMYSWWQYQLCDVFIEAVKPYFNQSQELESERGACRDTLWICLDTGLRLLH
PFMPYITEELWQRLPQPKEACRKDSIMISEYPSVVQEWTNDQVENEMETVLDSVNKLRSL
RPHTDIHERRPAFMLCRGVDIAAIIQCYQAQISTLASVSSLKILTEDDPTPPNCATNIVN
KDLSVYLQLRGALNTEAEREKLRKKRDEIQKQHDTLSQKMNASGYREKAPQSKQDEDMKK
IAALLEELEIIREAESELESNN
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggagaagccactcgatgagaaggagctggaaaggaagctgaagaaagatcagaaggca
agagagaaggaggagaagaggctcaaggcgaagcaaaaggaggcgattaggctacaggca
caagcagcatctgatgaaacaaagaagagcgacaagaaacaaaagaagaaaggcacaccg
gatgagaatcctgaggatttcgtcgacccggatactcctgctgggcagaagaagctgctt
gcttctcaaatggccaaacaatataatccagctgctgttgagaaatcatggtattcttgg
tgggaatcatctcaatattttgtagcagatgcgacgagttctaaaccaccatttgtaata
atcttgccacctcctaatgtaactggggtccttcatataggccatgcgattacagtagca
attgaggatgctatgattcgctggcggaggatgtcgggctataacgctttgtgggttcct
ggaatggaccatgctggcatagctacacaggtggttgtggaaaaaaggcttatgcgtgac
agaaacctgtcaagacatgatctggggcgtgataaatttctattggaggtcctccaatgg
aaagatcagcatggtggtaccatattgaaacaattacgtacacttggagcctcacttgat
tggtcacgcgagtgttttacaatggatgagaagagatcaaaagctgtaacagaagctttt
atcagactgcacaaagaaggcctaatatatagggataatcgcattgtgaactgggattgc
tcacttcgtactgcaatttcagatattgaggttgactattgtgaacttacagaagagact
ttgttagaggtccctggatgtagcactcttgtccagttcggtgttataataaattttgct
tatcctctagaggaagggttgggtgaaattatcgttgcaacaacaagaatagaaacaatg
cttggtgatactgcaatagctgttcatcctcaggatgaaagatacaagcgtttgcatgga
aaacatgctctccatccctttaatggccggaaactcaaaataatttgtgactccaagtta
gtggatcccagttttggtacaggagctgtcaagatcacgccagctcatgatcttgatgac
ttcaacactggcaaacgacataaacttgagttcattaatattttcacagatgatgggaac
ataaatgaaaacggaggtccacaatttgaaggaatgccacgtttcactgctcgggctgct
attattgatgcactaaaggcaaagggtctatacagaggcacagaaaataataagatgcgc
ttgggccgttgttcaagaactaaagatattgtggagccaatgatgaagccccaatggttt
gtcgattgtagtactatggcaaaggcagctcttgatgctgtgaaaactaaaaggatcgag
atcattccaatacaatacgagcaagactggtatagatggcttgaaaacatacgtgattgg
tgtatttcaagacagctttggtggggacaccgtataccagcttggtatgtaacgctagaa
gatgatgaggagaaagacataggttcttacattgatcactggataattgcaagaaatgaa
agtgatgcaatcctggaggcaaagcagaggtatccagggaaaaattataagttagaccaa
gatcctgatgtgctggatacatggttttcatctggtcttttcccattgtctgtgcttggt
tggccagacagcacagctgatcttagttcattctaccctacttctgtacttgaaactgga
ctggatatcctcttcttttgggtagcacggatggtgatgatgggaatgctacttggtggt
gatgtgccatttcagaaggtttacttgcatccaattatccgcgatccacatggccgcaaa
atggcgaagtgcctaggaaatgtcattgatcccattgatgtaataaatggtatatcactt
gaagatctcgggaaaaagttggaacatggcaatcttgatccaagtgagttagaaaaggcg
aaagaaggtcagaagaaggatttccctaatggcattccagagtgtggtactgatgccctt
cgttttgccctgatctcctacacttctcagtctgacaaaataaatctggatatcaagaga
gtgcacggatacagacaatggtgcaataaactgtggaatgccgtccgttttgccatgaac
aagcttggagatcaatacactccaccagcggctattgcgttgtgttctatgccacctctc
tgcaaatggatactctcagcacttaacaaggctgttggcaagactgtttcatcgatggaa
gcatgtaaattctccgaggccacatcgtctatgtactcttggtggcagtaccaactttgc
gatgtatttatagaagccgtaaaaccttacttcaatcaatctcaagagttggaatctgaa
agaggtgcttgtcgtgatacattatggatatgtctggataccggtttgcggttgctccac
ccgttcatgccttacataacggaggagctttggcagcgccttcctcagcctaaagaggct
tgtaggaaagattccataatgatatctgagtacccctcagttgttcaggaatggacaaat
gatcaagttgaaaatgaaatggagactgtgttggattctgtgaacaagctaagatctctt
cggccacatacagatatacatgaaagacggcctgcttttatgctctgccgtggggtagac
attgctgccattattcagtgctaccaggcgcagatttcaactcttgcttctgtttcatct
cttaagatactgacagaggatgatccaactccacccaactgtgccacaaatattgtcaac
aaagatctatccgtatacctccagctacgaggagctctaaacactgaagctgagcgtgag
aagctaaggaaaaagcgagatgagattcaaaagcaacacgacaccttgtcgcagaaaatg
aatgcctcaggctatcgcgagaaggctcctcagagcaagcaagatgaggacatgaaaaag
attgctgcattactggaggaacttgagatcattagagaagccgaaagtgaactagaatca
aacaactga
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