Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0508300
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Entry
Os10g0508300 CDS
T02163
Name
(GenBank) YABBY protein family protein
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dosa03000
]
Os10g0508300
Transcription factors [BR:
dosa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
Os10g0508300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_5
Motif
Other DBs
NCBI-ProteinID:
BAF26935
RAP-DB:
Os10g0508300
UniProt:
Q8L556
LinkDB
All DBs
Position
10
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AA seq
348 aa
AA seq
DB search
MSSSSSSSASSAAAAAFRPAVVQREQQVVEEKFPAAAAAMREMVLPPVAAAAADSEQEQL
CYVHCHYCDTVLVVSDLRSNHAHFLSICVHLALDSRAFLVHPWRRVLQVSVPSSSLFETV
TVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHH
SLLDEISTANSPTQLLLEQHGLGGLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSP
RTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF
GLMPDHQGLKKTSLLPQDHQRKDGLLKEGLYAAAAAAAAAANMGVAPY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgtcctcgtcgtcggcgtcgtcggcggcggcggccgcgtttcggccggct
gttgtgcagcgggagcagcaggtggtggaggagaaattccccgcggcggcggcggcgatg
cgggagatggtcctcccgccggtggcggcggcggcggcggactccgagcaggagcagctc
tgctacgtgcactgccactactgcgacaccgtgctcgtcgtcagtgatctcagatcaaac
cacgcacacttcctttccatttgtgttcatcttgctctcgactctcgagcttttcttgtt
catccatggcggcgtgtgttgcaggtgagcgtgccgagcagcagcctgttcgagacggtg
acggtgaggtgcggccactgcagcagcctcctcaccgtcaacatgaggggcctcctcctc
ccgaccaccgccgccgccgcgccaccaccacctcctcccccgccgccgccgccgccgccg
ccggccgcgcacttcccccactcgctcaacctcgcgccggccaaccctccccaccaccac
tccctcctggatgagatatcgacggcgaactccccgacgcagctgctgctggagcagcac
ggcctcggcggcctcatggcgagcgcggcaagctgcaggaacaacaactccccggcggcg
gcggcggctccgccgccgccaacgtcgcaggggaaagcggcggcgaaagagccgtcgccc
cggacgaacaccgccgtcatcaacagacctccggagaagaggcagcgtgtgccatcggcg
tacaaccgcttcatcaaggacgaaatccaacgcatcaaggctggcaatcccgacatctcg
cacagggaggccttcagcgcggctgccaagaactgggcacactttccgcacatccacttt
ggactgatgccggatcaccaggggctcaagaagaccagcctgcttcctcaggatcatcag
agaaaggatgggctactaaaggaagggctttatgcagcggcagctgctgctgcggcggcg
gccaacatgggtgttgcaccgtactaa
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