Oryza sativa japonica (Japanese rice) (RAPDB): Os10g0542200
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Entry
Os10g0542200 CDS
T02163
Name
(GenBank) Ubiquitin domain containing protein
KO
K04523
ubiquilin
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Os10g0542200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os10g0542200
03051 Proteasome [BR:
dosa03051
]
Os10g0542200
Membrane trafficking [BR:
dosa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
Os10g0542200
Proteasome [BR:
dosa03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
Os10g0542200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
AFG1_ATPase
Ubiquitin_5
RelB_leu_zip
Dsc3_N
Rad60-SLD_2
Motif
Other DBs
NCBI-ProteinID:
BAF27107
RAP-DB:
Os10g0542200
UniProt:
A0A5S6RBF7
LinkDB
All DBs
Position
10
Genome browser
AA seq
575 aa
AA seq
DB search
MGGGGGEAGGGDGGESSPAAAAAAAVAGAAALHIRCANGSKFTVRADLDATVGAFKEVVA
GSCDVPAAQQRLIYKGRILKDEQTLESYGVETDHTIHMVRGAGPPAGSAAPAAASPQASA
APSSGPTDGLGSLFPGLGGTGTAGTRPSGLFGSGFPELDQMQQQLSQNPNLMREIMNMPM
MQNLMNNPDLIRNMIMNNPQMRDIIDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRN
TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMGGEGNTAPNPFSALLGNQGSNQPRD
PATNAPNTGSESTTGTPAPNTNPLPNPWSSNAGGAQGATRAGSTGNARTGATGGLGGLGS
ADLSSLFGGLAGNTGTGATGGLGGLGSADLGSLLGGSPDSSSLSQILQNPVMMQMMQNIM
SDPQSMNQLLNFNPNTRNLMESNTQLREMFQNPEFIRQLTSPETMQQLLSFQQTLLSQLG
QNQPRQDGSQGGNATGMRGNVSLDTLMGMLSGLGAGGGIGVPNTSNVPPEELYATQLTQL
REMGFIDTAENIQALVATAGNVNAAVERLLGNLGQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcggaggaggcgaggccgggggcggcgacggaggggagtcctctcctgctgcg
gctgcggcggcggcggtggcgggggccgcggcgctgcacatccggtgcgcgaacgggtcc
aagttcaccgtgcgggccgacctcgacgccacggtgggggcgttcaaggaggtggtggcg
gggagctgcgacgtgccggcggcgcagcagcgcctgatctacaagggccggatcctcaag
gacgagcaaaccctagaaagctatggtgttgaaacagatcataccattcatatggtgcgt
ggcgctggtcccccagccggatcagctgcacctgctgcagccagcccccaagcttcagct
gctcctagcagcggcccaacagatggtcttggaagtttgtttcctggccttggtggtaca
ggaactgctggtaccaggccatctggtctttttgggtctggatttccagaattggatcaa
atgcagcagcagttaagccaaaaccccaacttaatgagggaaataatgaatatgccaatg
atgcagaatctcatgaataaccctgatttaattcgtaacatgatcatgaacaatcctcaa
atgcgtgatatcatcgaccggaatccagatcttgctcatgttctcaatgatccaagtgtt
ctccgccagacccttgaagcagccagaaaccctgaaatcatgagggagatgatgcggaac
acagacagagcaatgagcaacattgagtcttctcctgaagggtttaatatgctccgacgc
atgtatgaaactgtccaggagcctttcctaaatgcgacaacaatgggtggagaaggcaac
acagctccaaacccattctcagctcttcttggaaatcagggttctaaccaaccaagggat
cctgctacaaatgctccaaatactggctcagagtctacaacaggaacccctgctccaaac
actaatccacttccaaatccttggagctccaatgctggaggtgcgcaaggagcaacacgg
gcaggttctactggcaatgcaagaaccggtgccactgggggccttggagggttggggtca
gctgatctgagcagtttatttggtggtcttgccggtaatacaggaactggtgctactggt
ggtctaggagggttgggttcagcagatttgggaagtttgcttggtggttctcctgattct
tcttccttgagccagattttgcaaaaccctgttatgatgcagatgatgcagaatatcatg
tctgatccacagtccatgaaccagttgcttaacttcaacccaaatacacgcaacctcatg
gaatcaaacactcagttgagggaaatgttccaaaatccagaatttattcgccagcttaca
tccccagaaactatgcagcaattactctcgttccagcagacattattatcacagcttggt
caaaatcaacctaggcaggatggtagccaaggaggcaatgcgacaggcatgcggggaaat
gttagcctcgacaccttgatgggcatgcttagtgggcttggtgctggaggtggcataggt
gtacccaatacatccaatgttccaccggaagaactgtatgcaacacagctcactcagctc
cgagagatgggtttcatcgacactgcagagaacatccaggcgctagtcgcaactgctggg
aatgtgaatgctgcggtggagcgtcttcttggcaatcttggccagtag
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