Oryza sativa japonica (Japanese rice) (RAPDB): Os10t0467600-01
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Entry
Os10t0467600-01 CDS
T02163
Symbol
Os10g0467600
Name
(RAP-DB) Similar to cap-binding protein p28.
KO
K03259
translation initiation factor 4E
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os10t0467600-01 (Os10g0467600)
03012 Translation factors [BR:
dosa03012
]
Os10t0467600-01 (Os10g0467600)
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Os10t0467600-01 (Os10g0467600)
mRNA cycle factors
Common to processing body (P body) and stress granule
Os10t0467600-01 (Os10g0467600)
Translation factors [BR:
dosa03012
]
Eukaryotic type
Initiation factors
eIF-4
Os10t0467600-01 (Os10g0467600)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IF4E
Motif
Other DBs
RAP-DB:
Os10t0467600-01
LinkDB
All DBs
Position
chr10:join(17258323..17258531,17259501..17259669,17259799..17259924,17260778..17260843,17260962..17261012)
AA seq
206 aa
AA seq
DB search
MAEVEAAPIAAAETPEVAAAEGAAAAKAPHKLHRQWAFWYDIQSKPKPGAAWGTSLRKAY
TFDTVEEFWGLYDQIFRPSKVTVNADFHLFKAGVEPKWEDPECANGGKWTVPCSRKTTLE
NMWLETLMALIGEQFDESEEICGVVASVRQRGDKLALWTRTASNEAVQVNIGKKWKEIVD
YNDKMVYSFHDDAKREKPSRGGRYNV
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggtggaggcagcgccgattgcggcggcggagaccccggaggtggcggcggcg
gagggagcggcggcggcgaaggcgccgcacaagctgcataggcagtgggcgttctggtac
gacatccagtccaagcccaagcccggcgccgcgtgggggacctcgctccgcaaggcctac
accttcgacaccgtcgaggagttctggggcttgtatgatcagattttccgtccaagcaag
gtgacagtaaatgctgattttcatttattcaaggctggtgtagaaccaaagtgggaagac
ccagagtgtgcaaatgggggcaaatggactgtgccatgtagcaggaagaccacccttgag
aacatgtggcttgaaacgctgatggctctgattggagagcagtttgatgaaagtgaggaa
atttgtggagttgttgctagtgtccgccagagaggagacaagcttgcattgtggactagg
actgccagcaatgaagccgttcaggtaaacattggcaagaaatggaaggagattgttgac
tacaatgataagatggtctacagcttccatgatgacgccaagagggagaaaccaagcaga
ggtggacggtacaacgtgtaa
DBGET
integrated database retrieval system
