Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0139500
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Entry
Os11g0139500 CDS
T02163
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os11g0139500
Spliceosome [BR:
dosa03041
]
Complex C
Other components
hnRNP proteins
Os11g0139500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_PARP14_3
Efg1
Motif
Other DBs
NCBI-ProteinID:
BAF27550
RAP-DB:
Os11g0139500
UniProt:
Q0IUR5
A0A5S6R8S6
LinkDB
All DBs
Position
11
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AA seq
252 aa
AA seq
DB search
MSSPTFKLDSNAPTVSWADPKNNDSVSTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEK
VVLPPSRGGHDNRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVP
LPSSNGAPLLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDGRL
VYVVQQPGGQLPLASPPPQQAGHRSGSGGRHGGSGSRYGGGGGSSGSSRPGAKRQRGDDN
SSSRHKGRRRPY
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccaacattcaaactagattcaaatgctcctacagtcagctgggcagatcct
aagaataacgactcggtctctacttctcaggttaaatctgtatatgtgaaaaatctgccc
aagaatgttactcaagcacagctgaaaagactgtttgagcaccatggagaaattgaaaag
gttgttcttcctccttcaagaggaggtcatgataataggtatggttttgttcactttaag
gacaggtccatggccatgagggctctgcagaacacagagagatatgagcttgatggtcag
gtcctggattgctcacttgcgaaacctcctgctgctgataagaaggatgatagagtacca
ctacctagttcaaatggagctccattgctcccgagttatcctccacttggatatggtatc
atgtcagtaccaggtgcctatggtgctgctcctgctagtactgcacagcctatgctgtat
gctccaagagctcctccaggggcagcaatggttccaatgatgttaccggatggtcgtctc
gtatatgttgtacaacagcctggtggacagttgccgctggcttcgccgccgccgcagcaa
gctggacatcgtagcggcagtggaggacgtcatggcggcagtggcagccgctatggcggt
ggtggtggcagctccggcagtagcaggcccggtgcaaaacggcagagaggagatgacaac
agcagtagccgccacaaaggccggcgccgcccgtactga
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