Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0183700
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Entry
Os11g0183700 CDS
T02163
Name
(GenBank) SWIRM domain containing protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Os11g0183700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dosa03021
]
Os11g0183700
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os11g0183700
Transcription machinery [BR:
dosa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Os11g0183700
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Os11g0183700
PBAF complex
Os11g0183700
GBAF(ncBAF) complex
Os11g0183700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Motif
Other DBs
NCBI-ProteinID:
BAF27756
RAP-DB:
Os11g0183700
UniProt:
Q53KK6
LinkDB
All DBs
Position
11
Genome browser
AA seq
784 aa
AA seq
DB search
MPRKASSTSDSRLKWRKWKRNPTASPSPSNRSSAAAAAADHSDDSDSAAVNEDDDSAVPE
DADDETLAGAEDPVLDLREAEVLPSAEPVSAFPVATRRVVNRPHPSVLAVIAAERSACAG
EGSAAVAAAPVLENISYGQQQVLSGVLPDHASLATDTDKPSTYVCTPPNLMEGHGVTKQF
QGRLHVVPKHSDWFSPGIVHRLERQVVPQFFSGKSPGNTPEKYMLLRNKVIAKYLENPSK
RLAFAECQGLVANTAELYDLSRIVRFLDTWGIINYLASGSVHRGLRMATSLLREEPTGEL
QLLTAPLKSIDGLILFDRPKCNLQAEDISSLASNSEVVDFDAGLAELDGKIRERLSESSC
SYCLQPLTSLHYQSLKEADIALCSDCFHDARYITGHSSLDFQRIDGDNDRSENDGDSWTD
QETLLLLEGIEKYNDNWNNIAEHVGTKSKAQCIYHFIRLPVEDGLLENIEVPDASVPFRA
ETNGYPHLDCNGSTSGNLPQKIPPDNQLPFINSSNPVMSLVGFLASAMGPRVAASCASAA
LSVLTVDDDSRVNSEGICSDSRGQGPHPNFRDHNGGVSSSISPEKVKHAAMCGLSAAATK
AKLFADQEEREIQRLTATVINHQLKRLELKLKQFAEVETLLLKECEQVERIRQRIASDRV
RIVSTRLASPGNSLPGGSTSTMSSNPMSMSPRPMGVPGSMPQSSMPAPFANNMQGHGHPQ
MAFLQQQQRQQMLSFGPRLPLSAIQTQPSPQTSNIMFNPGMPNSVTPNHHQLLRSSSGNN
SSVG
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggaaggcctcgtcgacctcagattcgcgcctgaaatggcggaagtggaagcgg
aaccccaccgcgtccccgtcgccgtccaaccgctcgtcggccgccgccgccgcggcggac
cactccgacgactccgactccgccgccgttaacgaggacgacgactccgcggtccccgag
gacgccgacgacgaaaccctagccggggcggaggaccccgtgctcgacctccgcgaggcg
gaggtgctcccttcggcggagcccgtctcggcgttccccgtcgccacccgacgcgtcgtc
aaccggccgcacccgtccgtcctcgccgtcatcgcggccgagcgatccgcgtgcgcgggt
gagggttccgccgcggtggcggcggcgccggtgctggagaacatctcgtacgggcagcag
caggtgctctccggggtgctccctgaccacgcttcgctcgcgacggacactgacaagccg
tctacctatgtgtgcacgccgccgaatcttatggaggggcatggcgtgaccaagcagttc
cagggtcgcctacatgtcgtgcccaagcactcagattggttctccccagggatcgtgcac
aggctggaaaggcaggtggtgccacagttcttttcagggaagtcgccgggcaacactcca
gagaagtacatgctattgaggaataaggttattgcaaaatatttagagaacccaagcaag
aggcttgcttttgcagagtgccaggggcttgttgcgaacacagctgaattatatgatctc
agtaggattgttaggttcttagacacttggggaatcatcaattaccttgcgtctgggtcg
gtgcaccggggtctaaggatggcaacctcccttctaagggaggagccaaccggggagttg
caactattgactgcgccactgaaatcaattgatggcctaattttgtttgatcgaccgaaa
tgtaacctccaagcagaggacatttcttcattggcatcaaattcggaggttgtggatttt
gatgctggacttgcagaattggatggaaagattagggagcgattgtcagagagttcttgc
agttattgcttacagcctttgaccagcttgcactatcagtcactaaaggaggcagatatc
gctctatgctctgattgcttccatgatgcgagatatattactgggcattcaagcttagat
tttcagaggattgatggggataacgatagatcagaaaatgatggggatagttggactgat
caagaaacgttattgctgttggagggcatagagaagtacaatgacaactggaataacatt
gcagagcatgttggaacaaagtcaaaagcacaatgtatttaccattttattcgtcttcct
gttgaagatggtttgttagagaatattgaggtgccagatgcatctgtgccatttagagca
gaaaccaatggatacccacatttagattgcaatggcagtacttcaggaaatctacctcaa
aaaattccacctgataaccagcttccgttcattaattcttctaatccggtgatgtcactg
gttgggtttttggcttctgctatgggaccaagagttgcagcatcatgtgcaagtgctgct
ttatcagttttgacagtagatgatgattccagggtgaattcagaaggcatttgctctgat
tctaggggccaaggtccgcatccgaattttcgtgatcataatggtggtgtatcttcatcc
atctctccagaaaaggtgaagcatgctgccatgtgtggtttgtcggcagcagctacgaag
gctaaactttttgcagatcaagaggaacgtgaaatccaaagactaactgctactgtaata
aaccatcagttaaaaaggttggaactgaagctgaagcagtttgccgaagtcgagaccttg
cttttgaaagaatgcgagcaagtggagagaataaggcagaggattgcatctgaccgtgtc
cgaatcgtgtccacccgcttggcctcgcctggaaatagcctacctgggggtagtactagc
accatgtcatccaatccaatgagtatgagccccagaccgatgggcgtgccaggctcgatg
cctcaatccagtatgccagcaccatttgccaataacatgcaggggcatggtcacccccag
atggcattcttacaacagcagcagcggcagcagatgctgtcatttggacctcgtctgccg
ctgtcggccatccaaacccagccatccccacagacgtcaaacatcatgttcaacccaggc
atgcccaattctgtaacccctaatcatcatcaactgttgaggtcgtcttctggaaacaat
tcaagtgtaggatag
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integrated database retrieval system
