Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0247300
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Entry
Os11g0247300 CDS
T02163
Name
(GenBank) Alfa-tubulin
KO
K07374
tubulin alpha
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04145
Phagosome
dosa04517
IgSF CAM signaling
dosa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
Os11g0247300
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Os11g0247300
09142 Cell motility
04814 Motor proteins
Os11g0247300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os11g0247300
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os11g0247300
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dosa04812
]
Os11g0247300
04147 Exosome [BR:
dosa04147
]
Os11g0247300
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Os11g0247300
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
Os11g0247300
Cytoskeleton proteins [BR:
dosa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
Os11g0247300
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Os11g0247300
Exosomal proteins of other body fluids (saliva and urine)
Os11g0247300
Exosomal proteins of colorectal cancer cells
Os11g0247300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-ProteinID:
BAF27976
RAP-DB:
Os11g0247300
UniProt:
A3CA68
LinkDB
All DBs
Position
11
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD
RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA
SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGSEFDDGDEGDEGDEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgagggagtgcatctcgatccacatcgggcaggccggtatccaggtcgggaacgcgtgc
tgggagctctattgcctcgagcatggcatccagcctgatggacagatgcccggtgacaag
accgttgggggaggtgatgatgcttttaacaccttcttcagtgagactggtgctgggaag
catgtcccccgtgctgtcttcgtcgatcttgagcctaccgtgattgatgaggtgaggact
ggtgactaccgccagctcttccaccctgagcagctcatcagtggcaaggaggatgcagcc
aacaactttgcccgtggtcactacaccattggcaaggagattgttgatctgtgccttgac
cgcatcaggaagcttgccgacaactgcactggtctccagggcttccttgtgttcaacgct
gttggaggaggaacgggctccggtctcggttcccttctccttgagcgtctctctgtggac
tatggcaagaagtccaagctcgggttcaccgtgtacccgtcccctcaggtctccacctct
gtggttgagccatacaacagtgtcctctccacccactccctccttgagcacaccgatgtc
gctgtcctgctcgacaatgaggccatctatgacatctgccgccgctccctcgacattgag
cgcccaacctacaccaacctcaacaggcttgtgtcccaggtcatctcctcactgactgcc
tccctgaggttcgatggtgctctgaatgtggatgtcaacgagttccaaaccaacctggtg
ccctacccgaggatccacttcatgctttcctcctacgccccggtgatctcggccgagaag
gcctaccacgagcagctctccgtggcggagatcaccaacagcgccttcgagccgtcctcc
atgatggccaagtgcgacccgcgccacggcaagtacatggcgtgctgcctgatgtaccgc
ggcgacgtggtccccaaggacgtgaacgccgcggtggccaccatcaagacgaagcgcacc
atccagttcgtggactggtgccccacggggttcaagtgcggcatcaactaccagccgccc
agcgtcgtcccggggggagacctggccaaggtgcagagggccgtgtgcatgatctccaac
tccaccagcgtcgtcgaggtgttctcccgcatcgacatcaagttcgacctcatgtactcc
aagcgcgccttcgtccactggtacgtcggcgagggcatggaggagggggagttctccgag
gcccgcgaggacctcgccgcgctggagaaggactacgaggaggtcggctccgagttcgac
gatggtgacgagggtgatgagggtgacgagtactag
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