Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0293300
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Entry
Os11g0293300 CDS
T02163
Name
(GenBank) Survival motor neuron interacting protein 1 family protein
KO
K13130
gem associated protein 2
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dosa03041
]
Os11g0293300
Spliceosome [BR:
dosa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
Os11g0293300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIP1
Motif
Other DBs
NCBI-ProteinID:
BAF28075
RAP-DB:
Os11g0293300
UniProt:
Q53MM9
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Position
11
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AA seq
366 aa
AA seq
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MADNAAAAADSAARTRYARGQLEALRAAPSEEAQARLWAEVSAALAAAGFSGEYDGLMDA
EDPSIRKPGRKGKKAAGGGWKRHDAAAATQFLETDEVGAWRNGDSGVRYEHYVDEPRSVL
QVIEEPFVQGGNAEYEDADSDDDYDGILKPAFAVDGDPDFESGEPLDGFEYLRRVRWEAN
QIPRVKVAKIDLNTARNEQTPYMPEIPDIAKCSPDLCASKPWEDTFITYFSETRLAFSEL
DSSDGPSVSGGTKNLLKPSNRSEPQTDPTLTMIRNMDAVSRAATLRNYIDMIQSLDKLSR
NDCLWLFSLCVAVDTPLDAETCASLRSLLRKCANVLAAKLEMDDEVAMLNILITISGRFF
GQYDNH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacgccgccgccgccgccgacagcgcggcgcggacgaggtacgcgaggggc
cagctcgaggcgctgagggccgccccgtcggaggaggcgcaggcgcggctatgggccgag
gtgtccgccgccctcgccgccgccggcttctccggcgagtacgacgggctgatggacgca
gaggatccgtcgattaggaagccggggaggaaggggaagaaggccgccgggggcgggtgg
aagaggcacgacgcggcggcggcgacccaattcctggaaacggatgaggttggtgcctgg
aggaatggggattcaggggtccgctacgagcattacgtggatgagcctcgttccgtgctt
caagtgattgaggagccatttgttcagggtggaaatgcggagtacgaagatgctgacagc
gatgatgattatgatggaattttgaagcccgccttcgcagttgatggggatcccgatttc
gagtcgggtgagccgctcgatggctttgagtaccttcggcgtgtcaggtgggaagctaac
caaattcccagagtgaaggtggcgaagatagatttgaatacggctagaaatgaacagacg
ccttacatgccagaaattcctgatatagcaaagtgttctcctgatttgtgtgcatcaaag
ccctgggaagatacatttattacttatttctctgagacaagactggcattttcagagctt
gacagctcagatggaccatcggtttctggtggaacaaaaaacttgttgaaaccaagcaac
agatctgagccacagactgacccaacactgaccatgattcgcaacatggatgctgtctca
agagctgcaacactacggaactacatcgatatgattcaaagcttggataagctatcaagg
aatgactgcctgtggctgttttcactgtgtgtcgccgtggacactcccttggacgccgag
acatgtgcttcgctgaggtcgctgctgcgcaagtgcgcaaatgtccttgccgccaagttg
gagatggatgatgaagtcgctatgctgaacatactgatcacaatctctggacggttcttt
ggacagtatgataatcattag
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