KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0473100
Entry
Os11g0473100      CDS       T02163                                 
Name
(GenBank) Cdk-activating kinase assembly factor (MAT1) family protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03022  Basal transcription factors
dosa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Os11g0473100
  09124 Replication and repair
   03420 Nucleotide excision repair
    Os11g0473100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os11g0473100
   03400 DNA repair and recombination proteins [BR:dosa03400]
    Os11g0473100
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     Os11g0473100
DNA repair and recombination proteins [BR:dosa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     Os11g0473100
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-ProteinID: BAF28245
RAP-DB: Os11g0473100
UniProt: A0A8J8Y0U0
LinkDB
Position
11
AA seq 195 aa
MVVVSSGGGGGGNAWAKEMTIRRRMASIFNKTQDHFSCLKDYNDYLEEVEDMTFNLIEGI
DVEEIEAKIARYQQENAEQIYLSRAKRAEDLAAALKASRMNPGKAAASDTAAGSSQGISS
SAGVQGQYAPAAVGMSQPRPTGMAPQPIGGSSDPLQGDDEETMRLRAERGARAGGWTIEM
GKRRALEEAFSSIFI
NT seq 588 nt   +upstreamnt  +downstreamnt
atggtggtggtgtctagcggcggcggcggcggggggaacgcgtgggcgaaggagatgacc
atccgccgcaggatggccagcatattcaacaagacgcaggaccatttctcgtgtctgaaa
gactacaacgattatctagaagaggttgaggatatgactttcaacctgattgaggggata
gatgtcgaggagattgaagctaagattgccaggtaccagcaggaaaatgctgaacagata
tacttgtcccgggctaaaagggctgaagatcttgccgccgcacttaaagcaagcagaatg
aaccctggaaaggctgctgccagtgacacggctgctggaagctcccagggcattagcagc
agcgcaggagttcagggccagtatgcgcctgctgctgttgggatgtctcagccccggccg
acaggtatggccccccaaccaatcggcggttcatcggatccacttcagggagacgatgag
gagaccatgagattacgagcagagcgaggagctcgagcaggtggatggactatcgaaatg
ggcaagagaagagcactagaggaagcgttcagcagcatattcatctga

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