Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0572700
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Entry
Os11g0572700 CDS
T02163
Name
(GenBank) Similar to Carotenoid isomerase (Fragment)
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00906
Carotenoid biosynthesis
dosa01100
Metabolic pathways
dosa01110
Biosynthesis of secondary metabolites
Module
dosa_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Os11g0572700
Enzymes [BR:
dosa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
Os11g0572700
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Thi4
Pyr_redox_2
FAD_binding_3
GDI
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
BAF28490
RAP-DB:
Os11g0572700
UniProt:
Q0IS25
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Position
11
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AA seq
602 aa
AA seq
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MWGPPLRLIRRALVFPPLTSTTSRGGILSLQIPPRPLLPYKNPTQLELPRFTGAAMPLLL
LAAARPCAPLLAPSAAGAVVGRPSTARPLGRGTRRGAGAAAAAAVAAEKTVVKAEEEEEG
GGEYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYVIPGGSSGYYRRDGFTFDVGSSVMF
GFSDKGNLNLITQALEAVGHKMEVIPDPSTVHFHLPGDLSVLVHREYDDFVTELVNKFPH
EKEGILKFYGTCWKNAGDIARKFIKDQQLLSFIDAECFIVSTVNALQTPMINASMVLCDR
HFGGINYPVGGVGGIAMSLADGLVDKGSEIRYKANVTNVILENGKAVGVRLSNGKEFFAK
TVISNATRWDTFGKLLKVEELPEEEKNFQKNYVKAPSFLSIHMGVKASVLPADTDCHHFV
LEDDWANLEKPYGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLSRKDYEKKKEL
VATEIIKRLEKKLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRGKPKGLLAMPFN
TTSIDGLYCVGDSCFPGQGVIAVAFSGIMCAHRVAADIGLEQRSPVLDAGLLGLLRWLRT
LA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtggggccccccacttcgcctcatccgccgcgccctcgtcttccctccactaacctcc
accacctcccgcggcggaatcctctcgctgcagattccaccgcggcctctcctcccatat
aaaaaccccacccagctcgagctcccgcgcttcaccggcgccgccatgccgctcctcctc
ctcgccgccgcgcgcccgtgcgccccgctcctcgctccctccgccgccggagcagtagta
ggccggccgtccaccgcccgcccactgggacgagggaccaggagaggcgcgggcgcggcg
gcggcggctgcggtggcggcggagaagacggtggtgaaggcggaggaggaggaggagggt
gggggagagtacgacgcgatcgtggtggggtcggggatcggggggatggtggcggcgacg
cagctggcggcgaagggggcgagggtgctggtgctggagaagtacgtcatccccgggggg
agctccgggtactaccgccgcgacgggttcaccttcgacgtcggctcctccgtcatgttc
ggcttctccgacaaggggaacttgaatttgattacacaagcactagaagcagttgggcat
aagatggaagttataccggatccttctacggttcatttccacctacctggtgacctctca
gttcttgtgcatagagagtatgatgacttcgtcacggagctggttaataaatttcctcat
gaaaaggaaggaatcctgaaattctatggcacatgttggaagaatgctggggatattgct
cgcaagttcataaaagatcagcagttactctccttcatagatgctgagtgctttattgtg
agcacagtcaatgccttgcaaacacccatgattaatgcaagcatggtcttgtgcgatagg
cacttcgggggaattaactatccagttggtggtgttggtggtattgctatgtccttggca
gatgggcttgttgacaaaggcagtgaaatacgctacaaggctaatgtgaccaatgtaatt
ttagaaaatggcaaagctgttggagtcaggttatcaaatgggaaggagttctttgctaaa
acagtgatatcgaatgctaccagatgggatacatttggtaaactcttgaaagttgaagag
cttccagaagaggagaaaaacttccaaaagaattatgttaaagcaccatcattcctttcc
attcatatgggtgtcaaagcctcagttttgcctgctgatactgattgccaccattttgta
cttgaggatgactgggctaatttggagaagccttatggaagcatatttttaagtatccct
acagtgcttgacccatccttggctcccgaaggacaccatatacttcatatttttacaact
gcagggatagaggattgggaaggtctgtccaggaaggattatgagaagaaaaaggagctt
gtggcgacagagataataaagaggcttgaaaaaaagctgttccctggtcttcaggattca
atagtcctcaaggaggtaggctcaccaaaaacacaccgaagatttcttgcgcgaaatgat
ggtacatatggacccatgccacggggtaaaccaaagggattgctagcaatgcctttcaat
actacttcaatagatggcttgtactgtgttggcgacagctgttttcctgggcaaggtgta
attgctgtggcattttcagggatcatgtgtgctcatcgagttgcagctgatattggactg
gaacaaagatctcctgtactagatgcgggtcttcttgggctcctcagatggttgagaacg
cttgcttag
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