Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0610700
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Entry
Os11g0610700 CDS
T02163
Name
(GenBank) WD40-like domain containing protein
KO
K14003
prolactin regulatory element-binding protein
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Os11g0610700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os11g0610700
Membrane trafficking [BR:
dosa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
Os11g0610700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
RMC1_N
PEP5_VPS11_N
WD40_like
CFAP43_N
VPS11_N
DUF7165
Beta-prop_VPS8
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-ProteinID:
BAF28627
RAP-DB:
Os11g0610700
UniProt:
Q2R1C4
Q0IRN8
LinkDB
All DBs
Position
11
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AA seq
404 aa
AA seq
DB search
MARRGGGQTYGFPIYCASWLPLAHILNPPPPVEEGDADADAGAASSESPATPPPPPPLMA
ALGGGGGEGRSGVPNALVVAALDTSAGAAAAAALSPDPVLRMGTEEQVPYRMGVHPRGDG
VLCAFPNGCRLFRWESQEGEGPDNIALRADQEALTELSDAGLQLAVSFSGEGSILATGGE
DGHLRVFKWPSMDSILEEPDTKTSVKDLTFSSDEHFLAVNRSSGPCRVWDLKSAEVVANL
PREAGEIFGFCRFSNQTDNSQILFVTAMQGDYGKIISWNTTSWTRIGSNKITREAISAFA
VSPDCTLLAIGTIEGSIIVLSSKNMRSLVTVKKAHLGIITTLAFSQDSRTLLSTSFDSTA
RVTSIGSPKSRGISIWTMILVIILAILAYYYMQHKEDLLARFLH
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgcggcggcgggcagacgtacgggttcccgatctactgcgcctcgtggctg
cccctcgcccacatcctcaatccgcctcctccggtggaggagggggatgcggacgcggac
gcgggcgcggcctcgtcggagtcccccgctacgccgcctccgcctccgccgctcatggcg
gcgctcgggggagggggcggggaggggcggagcggcgtgcccaacgcgctggtggtggcc
gcgctcgacacctccgctggggcggccgcggcggcggcgctgtcccccgacccggtgttg
aggatggggacggaggagcaggtgccgtacaggatgggcgtccacccgcgcggcgacggc
gtcctctgcgcattccccaatggctgcaggttatttcgatgggaatcacaggaaggagag
ggacctgataatatagctttgagggctgatcaggaggcactgacagagttgagtgatgct
ggtttgcagttagctgtgtcattcagtggagaaggttcaatacttgcgactggtggtgag
gatggtcatttaagggtcttcaaatggccttccatggattccattcttgaagaacccgat
acgaaaacatcagtgaaggatttaaccttcagctccgatgaacatttccttgctgtgaac
agaagcagtggcccatgtagagtatgggacttgaagtcagcagaagttgtagctaatctc
ccaagagaagcaggagaaatatttggtttctgcagattctctaatcagactgacaacagt
cagatcctctttgttacagcgatgcaaggtgattatgggaaaataatatcttggaatacg
acctcgtggacgagaattgggtcaaataaaataacacgtgaggcaatttcagcatttgct
gtctcgcctgattgtacacttcttgcaattggaactattgaaggaagcattattgtacta
agttcaaaaaatatgcggtcgcttgtaacagttaaaaaggcacatcttggcattattact
acattggcattctctcaagattcaaggaccttgctgtcgacttccttcgattctactgct
agggtgacttcaattggatcacctaagagtcgtggtataagtatatggaccatgatactg
gttattattcttgcaattttggcatactactatatgcagcataaagaggatctcttagca
aggtttctacattga
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