Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0610900
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Entry
Os11g0610900 CDS
T02163
Name
(GenBank) Similar to Seryl-tRNA synthetase (EC 6.1.1.11) (Fragment)
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Os11g0610900
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dosa01007
]
Os11g0610900
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dosa03016
]
Os11g0610900
Enzymes [BR:
dosa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Os11g0610900
Amino acid related enzymes [BR:
dosa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Os11g0610900
Transfer RNA biogenesis [BR:
dosa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Os11g0610900
Prokaryotic type
Os11g0610900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF244
EAD9
Motif
Other DBs
NCBI-ProteinID:
BAF28628
RAP-DB:
Os11g0610900
UniProt:
Q2R1C1
Q0IRN7
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All DBs
Position
11
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AA seq
509 aa
AA seq
DB search
MLTCGRFLSSSAAASTPSLSPFRNLTLSLLRRPHLRLLSSSATASAAAAAVEPDTKGGAG
GGAAKPQWKAAIDFKWIRENTDAVAANIRDRNSAANLDLVLQLYDEYLALQKEVERLRAE
RNAVANKMKGKLEPSVRQALVEEGKNLKEGLIALEEDLVQLTDKLQLEAQSIPNTTHPDA
PVGGEESSVVRKEVGSQRNFNFTIRDHLQLGKELDLFDFDAAAEVSGSKFYYLKNEAVLL
EMALVNWAITEVSKKGFTPLITPEIVRSSVVEKCGFQPRAQNTQVYSIDNSDQCLIGTAE
IPVGGIHMDSILPDSDLPRKYVAYSHCFRTEAGAAGAATRGLYRVHQFSKVEMFVFCRPE
ESDKCHEELITIEEELYASLGLHFKTLDMATGDLGAPAYRKFDIEAWMPGLDRYGEISSA
SNCTDYQSRRLGIRFRPSPADPPPANAKKGKGSSGPTQFVHTLNATAVAVPRLIICILEN
FQQEDGTVVIPEPLRPFMGGLEVLSPKTK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctgcggccgcttcctctcctcctccgccgccgcctccaccccctccctctcc
cccttccggaacctaaccctctccctcctccgccgtccccatctccgcctcctctcctcc
tccgccaccgcctccgccgccgccgccgccgtcgagcccgacaccaagggtggcgcgggt
ggcggcgccgcgaagccgcagtggaaggcggcgatagacttcaagtggatccgggagaac
acggacgccgtcgccgccaacatccgcgaccgcaactccgccgccaacctcgacctcgtc
ctccagctctacgacgagtacctcgccttgcagaaggaagttgaacggctccgagctgaa
agaaatgcagttgctaataagatgaaagggaaattagaaccatctgtgcgtcaagccctt
gttgaagaaggcaagaacctgaaagaagggcttattgccctagaagaggaccttgttcag
ctgactgataagcttcaactagaagcacaaagcattcctaacaccacacatccagatgct
cctgtagggggtgaggaaagttctgtcgtcagaaaagaggttggtagtcagagaaacttc
aatttcaccattagagatcaccttcagctgggaaaagaacttgatttgtttgattttgat
gcagctgctgaggttagtggctcgaagttctactacttaaagaatgaagctgttctgttg
gagatggcccttgttaattgggccatcactgaggtctcaaagaaaggtttcacaccacta
ataactccggagattgtaaggtcatctgttgttgagaaatgtggcttccagccaagggcc
caaaatactcaggtttattcgatcgataacagtgatcagtgcctcataggaactgcagag
attcctgttggcggcatccatatggactctatactccctgattctgatttgcctcgaaaa
tatgtagcctattcacattgttttcgcacagaagctggtgccgcaggtgctgccactagg
ggcctctaccgtgtacatcagtttagcaaggttgagatgtttgtattttgccggccagag
gagagcgacaagtgccatgaagaacttatcactattgaagaggaactttatgcatcactt
ggacttcatttcaaaactttggatatggcgactggggatctgggagcaccggcctacaga
aagtttgacattgaggcatggatgccaggcctagataggtacggtgagatctcgagcgcg
tcaaactgcacagactatcagagcaggcggctgggcatccggtttcgcccatcacctgca
gatcctccaccggcgaacgccaagaaaggaaagggcagctcaggcccaacacagtttgtc
cacacgctcaacgcgacagcggttgctgttcctcgcttgatcatatgcatcctggagaac
tttcagcaagaagatggaacggttgtgatcccagagccactgaggcccttcatgggcgga
cttgaagtgctctccccgaaaaccaaatga
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