KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0615100
Entry
Os11g0615100      CDS       T02163                                 
Name
(GenBank) A49-like RNA polymerase I associated factor family protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Os11g0615100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dosa03021]
    Os11g0615100
Transcription machinery [BR:dosa03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     Os11g0615100
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-ProteinID: BAF28637
RAP-DB: Os11g0615100
UniProt: Q2R177 Q0IRM8
LinkDB
Position
11
AA seq 484 aa
MADHQPAASSPKRKKKHSKKPEDSNATVDDSLAAAASPSPKKKEKHSKKKREAIDATMAA
ASPKKKEKKHSKKQEDTNVPEKKREVVHVTVDASLTGAAAAGAAPVVAYFPTGYDPLAAG
GGRKGREAPRTRLFRHTKHPSRIELVVGAATGGGGGPDFVGRSYAGEAVLPQLTGYALGV
LDKASGTLKVVPIAANKKLAHSQHSGAVGEAVSSAGDADLKVQDITKAFGTQKDKAKDIK
WQSLNEQRNDPSAFMDLDLGNADTSVGANESQEPTVRNIPPYDPAADTSERAYLFDEIIP
KSIRPHLVDIIGHFESGEISSKGYGSFVSNRVNKLQELQGEDKERLAWILSYITHLLSLL
ARNSSMSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLY
ADDFRSDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPKEATRRK
RRRF
NT seq 1455 nt   +upstreamnt  +downstreamnt
atggcggaccaccagcccgccgcctcctcccccaagaggaagaagaagcactccaagaag
ccggaggacagcaatgccaccgtcgacgactccctcgccgccgccgcctccccctccccc
aagaagaaggagaagcactccaagaagaagcgggaagccatcgatgccaccatggccgct
gcctcccccaagaagaaggagaagaagcactccaagaagcaggaagacaccaatgtcccc
gagaagaagcgggaagtcgtccatgtcaccgtggacgcctccctcaccggcgccgccgcc
gcgggcgcagcccccgtcgtcgcctacttcccgaccggctacgaccccctggccgccggc
ggcggcaggaagggtagagaggccccccgcacgaggctgttccgccacacgaagcaccca
tcccgcatcgagctcgtggtcggcgccgccactggtggcggcggagggccggacttcgtc
gggcggagctacgccggcgaggccgtgctgccgcagctcactggctacgcgctcggtgtc
ctcgacaaggcctccggcaccctcaaggtcgtccccatcgccgccaacaagaaactggcg
cattcgcagcactctggggcagtaggggaggcagtatcatcagcaggagatgctgacttg
aaggtacaggatattaccaaggcgtttggaacccagaaagacaaggccaaggatattaag
tggcagtcattaaatgaacaaaggaatgatccttctgcttttatggaccttgaccttggg
aatgctgataccagtgtgggtgctaatgaaagtcaagaaccaactgtacggaacattcca
ccttatgatcctgcagcagatacatcagaaagggcatatctttttgatgagattattcca
aagagtataaggccgcaccttgtggatattataggacattttgagtcaggagaaatttct
tcaaaaggctatgggagttttgtgtcaaatcgtgttaataaattacaggagcttcagggt
gaagataaggagaggcttgcttggatactgtcctacatcacacatctcctatccctgctg
gcacggaacagctccatgtccaagcggcacagaaaggaaaaccaggctaccagtggacca
gtgatcccacagtatgtatatcgtaagatggtgctaatgtttacggaaccaggatctagc
gccttgtcaacagagaaacacgagcttctgatcaactacattctcgtactcacgctctac
gctgatgacttcagatccgaccctaaggatatatgtgaagacctgaaaatgacccgccag
atgattaaaccatattatgaccagctgggatgcaaatcttcgtcggccggtgcatttaaa
tcctctgtaatgacacttccagctcccctcaagttcccaaaagaagctacaaggagaaag
cgacgaaggttctga

DBGET integrated database retrieval system