Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0629200
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Entry
Os11g0629200 CDS
T02163
Name
(GenBank) Similar to Vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04142
Lysosome biogenesis
dosa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Os11g0629200
04142 Lysosome biogenesis
Os11g0629200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dosa04131
]
Os11g0629200
Membrane trafficking [BR:
dosa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Retromer subcomplex
Os11g0629200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-ProteinID:
BAF28675
RAP-DB:
Os11g0629200
UniProt:
Q2R0X0
B7EAL4
LinkDB
All DBs
Position
11
Genome browser
AA seq
304 aa
AA seq
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MNYIIGAFKAPCDVFITFADERSRKQVAIKKDNGKTLMVPAFQSLETIAGEVSVAPVPGK
RVEHQGVKIELLGQIELYHERGHFYDFTSLVRELEVAGEIYERKTYPFEFSTVEMPYESY
NGTNVRLRYILKVTIGRPYATSVVECRDFCVRNYTPLPSINNSIKMEVGIEDCLHIEFEY
SKSKYHLKDVIVGKIYFLLVRIKIKNMELEIRRRESTGSGPGTYIETETLAKFELMDGAP
VRGESIPVRLFLTPYELTPTYRNINNKFNVKYYLNLVLVDEEDRRYFKQQEITMYRLQET
PQSS
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatcatcggagcattcaaggcgccctgcgacgtcttcatcaccttcgccgat
gagaggagccggaagcaggtggcgatcaagaaggataacgggaagacgttgatggtgccg
gccttccagagcctggagactattgcaggagaggtgtcggtagcgcccgttccaggtaaa
agggtggagcaccaaggtgtcaagattgagctgctgggtcagatagagctgtaccatgag
agaggtcacttctatgacttcacttcgttagtgcgagagttagaggttgctggtgaaatc
tatgaaaggaagacttatccatttgaattctctactgttgagatgccttatgagtcgtat
aacggaacaaatgtcagattgaggtacatcctgaaagttacaattggcagaccatatgct
actagtgttgtggaatgtcgagatttctgtgtaaggaattacactcctcttccttcaatt
aacaatagcatcaagatggaagttggaattgaagattgtttgcatattgaatttgagtac
agcaaaagcaagtaccatctcaaggatgtgatcgtgggaaaaatctattttcttctagtc
agaataaagataaagaacatggagcttgagattcgtcggcgggaatcaacaggatctggg
cctggcacatatattgagactgagacacttgcaaagtttgagttgatggatggcgctccc
gtaagaggtgagtctattccggtaagactcttcttgacaccatatgagttgaccccgact
taccgcaacataaacaacaagttcaatgtcaagtactacctgaacctggttcttgttgac
gaggaagaccggaggtacttcaagcagcaagagatcacaatgtaccgccttcaagaaact
ccgcaatcttcataa
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