Oryza sativa japonica (Japanese rice) (RAPDB): Os11g0637700
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Entry
Os11g0637700 CDS
T02163
Name
(GenBank) RNA-binding region RNP-1 (RNA recognition motif) domain containing protein
KO
K14411
RNA-binding protein Musashi
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Os11g0637700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dosa03019
]
Os11g0637700
Messenger RNA biogenesis [BR:
dosa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Os11g0637700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
BAF28698
RAP-DB:
Os11g0637700
UniProt:
Q2R0P4
Q0IRG7
LinkDB
All DBs
Position
11
Genome browser
AA seq
467 aa
AA seq
DB search
MEADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA
ERVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEA
DFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR
AVPKELSPGPSMRSPVGGFNYAVNRANNFLNGYTQGYNPSPVGGYGMRMDARFGLLSGGR
SSYPSFGGGYGVGMNFDPGMNPAIGGSSSFNNSLQYGRQLNPYYSGNSGRYNSNVSYGGV
NDSTGSVFNSLARNLWGNSGLSYSSNSASSNSFMSSANGGLGGIGNNNVNWGNPPVPAQG
ANAGPGYGSGNFGYGSSETNFGLGTNAYGRNAGSGVVNTFNQSTNGYGRNFGDSSGGGGG
GGGGSIYGDTTWRSGSSELDGTSPFGYGLGNAASDVTAKNSAGYMGH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgccgggaagctgttcatcggcggcatctcgtgggacaccaacgaggac
cgcctccgcgagtacttcgacaagtacggcgaggtggtggaggccgtcatcatgcgcgac
cgcgccaccggccgcgcccggggattcggcttcatcgtcttcgctgaccctgccgtcgcc
gagcgggtcattatggagaagcacatgatcgatggccgcatggtggaggcgaagaaagct
gttcccagggacgatcagcacgctcttagcaagagcggcgggagcgctcatggatcgccg
gggcccagccgcaccaagaagatattcgttggggggctagcgtccaccgtgacggaggcg
gacttcaggaagtactttgagcagttcgggacgatcaccgatgtcgtggtgatgtatgat
cacaacacgcagcgtcccagaggttttgggttcattacgtacgattcggaggatgctgtg
gacaaggcattgttcaagaccttccatgaactgaacggtaagatggttgaggtcaagcgc
gcggttcctaaggaactatcacctgggcctagcatgcgttctcctgtcggtggattcaac
tatgccgtgaacagagccaataacttcctcaatggatacacccagggttataatccgagc
ccagtcggtggctatggaatgaggatggatgcaaggtttgggcttctatcgggtggccgt
agtagttatccttcttttggtggtggttatggagtcggtatgaattttgatccagggatg
aaccctgctattgggggaagctcaagcttcaacaacagtctccagtatggaaggcagctt
aatccatactacagtggaaattctggtagatacaatagcaatgttagctatggtggagtc
aatgacagtactgggtcagtgttcaactcgctggctcgtaatttatggggtaattcaggt
cttagttactcttccaactctgcaagctctaattccttcatgtcatctgccaatgggggc
cttggtggaattgggaacaacaatgtgaattggggaaaccctcctgtgcctgcacaaggt
gctaatgctggcccaggctatggcagtgggaacttcggttatggatccagtgaaaccaac
tttggtctcggtaccaatgcttatggaaggaatgctggatctggtgttgttaatacattc
aatcaatcaaccaatgggtatggaaggaactttggagattcatcaggaggaggtggcggt
ggtggcggtggctccatctatggagacacaacttggagatccggatcttctgagcttgat
ggaaccagcccatttggctatgggcttgggaatgcagcttcagatgttacagcaaagaac
tcagcaggttacatggggcattaa
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